RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Pnpla8Q8K1N1 776 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pcdhb17Q91VD8 799 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 4930503E14RikQ9D583 177 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 2010005H15RikQ9D8D6 97 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tnfrsf21Q9EPU5 655 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Vav3Q9R0C8 847 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Orc1Q9Z1N2 840 aaKnown RBP9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Olfr220E9Q050 325 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm7275E9Q1B3 247 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Olfr694K7N641 315 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Zw10O54692 779 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 DcxO88809 366 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Spp1P10923 294 aaKnown RBP9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Nkx2-5P42582 318 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Zfp217Q3U0X6 1041 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Trafd1Q3UDK1 580 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 FaxcQ3UMF9 409 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Srbd1Q497V5 1015 aaKnown RBP9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Atp13a4Q5XF90 1193 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Defa17Q64016 82 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gpsm1Q6IR34 673 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pik3c3Q6PF93 887 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Glis3Q6XP49 780 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 1700001J03RikQ80ZR8 219 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Noc4lQ8BHY2 516 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ptpn7Q8BUM3 359 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Fbxo21Q8VDH1 627 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Sh2b2Q9JID9 621 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Uts2Q9QZQ3 123 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Wnt8bQ9WUD6 350 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm32742A0A1B0GT42 1604 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Syndig1A2ANU3 258 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tmem245B1AZA5 876 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm3095E9Q058 166 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm21319F6YNI8 144 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Grip2G3XA20 1042 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Il4i1O09046 630 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Clk3O35492 638 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Il1rl1P14719 567 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Ica1P97411 478 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Anxa4P97429 319 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 DtymkP97930 212 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pdss1Q33DR2 409 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Arnt2Q61324 712 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Otud6aQ6IE21 290 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Olfr389Q7TRX7 312 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Pgrmc2Q80UU9 217 aaKnown RBP9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Fbxo28Q8BIG4 368 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tubgcp5Q8BKN5 1024 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Spon2Q8BMS2 330 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 KyQ8C8H8 661 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gprc5cQ8K3J9 440 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Efcab7Q8VDY4 628 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Efhc1Q9D9T8 648 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Olfr704Q9EPF6 315 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Trpm5Q9JJH7 1158 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Sh3glb1Q9JK48 365 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Dkk3Q9QUN9 349 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gm5114W4VSN8 858 aa9.29□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Kiaa0556Q8C753 1610 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 4930579F01RikE9Q3L6 325 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Herc6F2Z461 1003 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Slc27a2O35488 620 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Bnc1O35914 961 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gsta1P13745 223 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 FgrP14234 517 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Nckap1P28660 1128 aaKnown RBP9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Serpina3cP29621 417 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Cyp2c39P56656 490 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Morf4l1P60762 362 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Alkbh5Q3TSG4 395 aaKnown RBP9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Gsta1Q6P8Q0 223 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Nudcd1Q6PIP5 582 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 DaglaQ6WQJ1 1044 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Q8BGN9 141 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Sh3kbp1Q8R550 709 aaKnown RBP9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Epsti1Q8VDI1 314 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Rev1Q920Q2 1249 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Lsm12Q9D0R8 195 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Tcirg1Q9JHF5 834 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 ChmlQ9QZD5 621 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Khdrbs3Q9R226 346 aaKnown RBP9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Cyb561d2Q9WUE3 222 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Hist1h2abC0HKE1 130 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Hist1h2acC0HKE2 130 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Hist1h2adC0HKE3 130 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Hist1h2aeC0HKE4 130 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Hist1h2agC0HKE5 130 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Hist1h2aiC0HKE6 130 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Hist1h2anC0HKE7 130 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Hist1h2aoC0HKE8 130 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Hist1h2apC0HKE9 130 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Itgb3O54890 787 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 IppP28575 584 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 TubP50586 505 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Serpinb5P70124 375 aaKnown RBP9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 YdjcQ14BV6 310 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Fam35aQ3UEN2 891 aa9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Esrp1Q3US41 680 aaKnown RBP9.28□□□□□ -0.92
Ccdc47-201ENSMUST00000002043 Prr7Q3V0I2 269 aa9.28□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms