RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 SSX2IPQ9Y2D8 614 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 CXorf49A8MYA2 514 aaPredicted RBP17.63■□□□□ 0.41
PHGDH-208ENST00000641023 COCHO43405 550 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 TYROBPO43914 113 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 KRT38O76015 456 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 TACR2P21452 398 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 RENBPP51606 427 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 IL9RQ01113 521 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 TWF1Q12792 350 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 CDH17Q12864 832 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 CRYMQ14894 314 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 KLHDC8BQ8IXV7 354 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 NSMCE1Q8WV22 266 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 CKAP2Q8WWK9 683 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 AUTS2Q8WXX7 1259 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 UBP1Q9NZI7 540 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 PRKAG2Q9UGJ0 569 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 RPS6KL1Q9Y6S9 549 aa17.63■□□□□ 0.41
PHGDH-208ENST00000641023 ACSL4O60488 711 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 RAMP2O60895 175 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 GJB5O95377 273 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 FGBP02675 491 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 SNRPAP09012 282 aaKnown RBP17.62■□□□□ 0.41
PHGDH-208ENST00000641023 OR1E1P30953 314 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 MAPKAPK2P49137 400 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 EPHB3P54753 998 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 PLD1Q13393 1074 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 OLIG2Q13516 323 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 PARP15Q460N3 678 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 SPANXN3Q5MJ09 141 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 NADSYN1Q6IA69 706 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 ZNF354CQ86Y25 554 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 CNPY4Q8N129 248 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 FIBCD1Q8N539 461 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 GDAP1Q8TB36 358 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 PLD4Q96BZ4 506 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 HMCESQ96FZ2 354 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 OXNAD1Q96HP4 312 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-208ENST00000641023 IL22Q9GZX6 179 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 RETREG1Q9H6L5 497 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 SP110Q9HB58 689 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 SMYD2Q9NRG4 433 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 GOLGA6L7A0A1B0GV03 622 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 FGF18O76093 207 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 ZWINTO95229 277 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 VIMP08670 466 aaKnown RBP17.62■□□□□ 0.41
PHGDH-208ENST00000641023 RPA3P35244 121 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-208ENST00000641023 GEMP55040 296 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 YBEYP58557 167 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-208ENST00000641023 POLD3Q15054 466 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-208ENST00000641023 SEPT7Q16181 437 aaKnown RBP17.62■□□□□ 0.41
PHGDH-208ENST00000641023 DNAJB7Q7Z6W7 309 aaPredicted RBP17.62■□□□□ 0.41
PHGDH-208ENST00000641023 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.62■□□□□ 0.41
PHGDH-208ENST00000641023 DENND1AQ8TEH3 1009 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 AZIN2Q96A70 460 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 MTBPQ96DY7 904 aa17.62■□□□□ 0.41
PHGDH-208ENST00000641023 TEX28O15482 410 aa17.61■□□□□ 0.41
PHGDH-208ENST00000641023 ASMTLO95671 621 aa17.61■□□□□ 0.41
PHGDH-208ENST00000641023 SERPINB9P50453 376 aa17.61■□□□□ 0.41
PHGDH-208ENST00000641023 PPIGQ13427 754 aaKnown RBP eCLIP17.61■□□□□ 0.411e-6■□□□□ 10
PHGDH-208ENST00000641023 C5orf22Q49AR2 442 aa17.61■□□□□ 0.41
PHGDH-208ENST00000641023 GKAP1Q5VSY0 366 aaPredicted RBP17.61■□□□□ 0.41
PHGDH-208ENST00000641023 MARC1Q5VT66 337 aa17.61■□□□□ 0.41
PHGDH-208ENST00000641023 ZNF449Q6P9G9 518 aa17.61■□□□□ 0.41
PHGDH-208ENST00000641023 ITIH5Q86UX2 942 aa17.61■□□□□ 0.41
PHGDH-208ENST00000641023 SPATA22Q8NHS9 363 aa17.61■□□□□ 0.41
PHGDH-208ENST00000641023 PSMG2Q969U7 264 aa17.61■□□□□ 0.41
PHGDH-208ENST00000641023 MAGEB18Q96M61 343 aa17.61■□□□□ 0.41
PHGDH-208ENST00000641023 PAIP2Q9BPZ3 127 aaKnown RBP17.61■□□□□ 0.41
PHGDH-208ENST00000641023 ZBED2Q9BTP6 218 aa17.61■□□□□ 0.41
PHGDH-208ENST00000641023 NSRP1Q9H0G5 558 aaKnown RBP17.61■□□□□ 0.41
PHGDH-208ENST00000641023 ZNF212Q9UDV6 495 aa17.61■□□□□ 0.41
PHGDH-208ENST00000641023 INSL5Q9Y5Q6 135 aa17.61■□□□□ 0.41
PHGDH-208ENST00000641023 FAM155BO75949 473 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 USP1O94782 785 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 HLA-DQB2P05538 268 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 DRD4P21917 467 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 CNTFP26441 200 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 CA8P35219 290 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 NAB1Q13506 487 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 C16orf59Q7L2K0 433 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 TMEM135Q86UB9 458 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 SPATS2Q86XZ4 545 aaKnown RBP17.6■□□□□ 0.41
PHGDH-208ENST00000641023 LGI2Q8N0V4 545 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 BANPQ8N9N5 519 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 PABPC5Q96DU9 382 aaKnown RBP17.6■□□□□ 0.41
PHGDH-208ENST00000641023 ZNF419Q96HQ0 510 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-208ENST00000641023 APOL2Q9BQE5 337 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 RXFP1Q9HBX9 757 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 TRIM49D1C9J1S8 452 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 GOLGA8RI6L899 631 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 TM9SF1O15321 606 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 ATP9BO43861 1147 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 LILRB3O75022 631 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 PEX11BO96011 259 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 MT-CYBP00156 380 aaPredicted RBP17.6■□□□□ 0.41
PHGDH-208ENST00000641023 CTSAP10619 480 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 WDR4P57081 412 aaKnown RBP17.6■□□□□ 0.41
PHGDH-208ENST00000641023 C1QTNF8P60827 252 aa17.6■□□□□ 0.41
PHGDH-208ENST00000641023 HTRA4P83105 476 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms