RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 CHPT1Q8WUD6 406 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 FAM111AQ96PZ2 611 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 RAB6BQ9NRW1 208 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 POLR3BQ9NW08 1133 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-227ENST00000640648 TRPM5Q9NZQ8 1165 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 TECPR2O15040 1411 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 PPLO60437 1756 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 E2F8A0AVK6 867 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 KRT87PA6NCN2 255 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 DNAJA2O60884 412 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 TAL1P17542 331 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-227ENST00000640648 PSMB9P28065 219 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 SRP54P61011 504 aaKnown RBP8.4□□□□□ -1.06
NECAP1-227ENST00000640648 POLD3Q15054 466 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-227ENST00000640648 SH3RF1Q7Z6J0 888 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 TICAM1Q8IUC6 712 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 SLC20A1Q8WUM9 679 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 BBS4Q96RK4 519 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 SLC22A4Q9H015 551 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 SPRTNQ9H040 489 aaPredicted RBP8.4□□□□□ -1.06
NECAP1-227ENST00000640648 EBF3Q9H4W6 596 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 PCDH9Q9HC56 1237 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 RIC8BQ9NVN3 520 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 GTSE1Q9NYZ3 720 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 NINJ2Q9NZG7 142 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 CDH9Q9ULB4 789 aa8.4□□□□□ -1.06
NECAP1-227ENST00000640648 BBIP1A8MTZ0 92 aa8.4□□□□□ -1.07
NECAP1-227ENST00000640648 RNF225M0QZC1 329 aaPredicted RBP8.4□□□□□ -1.07
NECAP1-227ENST00000640648 FAM189A1O60320 539 aa8.4□□□□□ -1.07
NECAP1-227ENST00000640648 TBX10O75333 385 aa8.4□□□□□ -1.07
NECAP1-227ENST00000640648 ECDO95905 644 aaPredicted RBP8.4□□□□□ -1.07
NECAP1-227ENST00000640648 RARBP10826 455 aa8.4□□□□□ -1.07
NECAP1-227ENST00000640648 PRKCIP41743 596 aa8.4□□□□□ -1.07
NECAP1-227ENST00000640648 KCNK10P57789 538 aa8.4□□□□□ -1.07
NECAP1-227ENST00000640648 RAB4BP61018 213 aa8.4□□□□□ -1.07
NECAP1-227ENST00000640648 STXBP2Q15833 593 aa8.4□□□□□ -1.07
NECAP1-227ENST00000640648 ACSBG2Q5FVE4 666 aa8.4□□□□□ -1.07
NECAP1-227ENST00000640648 HEATR6Q6AI08 1181 aaKnown RBP8.4□□□□□ -1.07
NECAP1-227ENST00000640648 IDO2Q6ZQW0 420 aa8.4□□□□□ -1.07
NECAP1-227ENST00000640648 ASRGL1Q7L266 308 aa8.4□□□□□ -1.07
NECAP1-227ENST00000640648 LHFPL3Q86UP9 236 aa8.4□□□□□ -1.07
NECAP1-227ENST00000640648 PAFAH2Q99487 392 aa8.4□□□□□ -1.07
NECAP1-227ENST00000640648 COPS7BQ9H9Q2 264 aaPredicted RBP8.4□□□□□ -1.07
NECAP1-227ENST00000640648 ZNF302Q9NR11 478 aa8.4□□□□□ -1.07
NECAP1-227ENST00000640648 IL17RBQ9NRM6 502 aa8.4□□□□□ -1.07
NECAP1-227ENST00000640648 CATSPERZQ9NTU4 200 aa8.4□□□□□ -1.07
NECAP1-227ENST00000640648 ZC3H7BQ9UGR2 993 aaKnown RBP8.4□□□□□ -1.07
NECAP1-227ENST00000640648 ERGIC3Q9Y282 383 aa8.4□□□□□ -1.07
NECAP1-227ENST00000640648 SF3B1O75533 1304 aaKnown RBP eCLIP8.39□□□□□ -1.077e-6■■■□□ 17.2
NECAP1-227ENST00000640648 SHPRHQ149N8 1683 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 GSAPA4D1B5 854 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 EPHB6O15197 1021 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 KCNN4O15554 427 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 NR3C2P08235 984 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 CD40LGP29965 261 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 SELPLGQ14242 412 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 PIGHQ14442 188 aaPredicted RBP8.39□□□□□ -1.07
NECAP1-227ENST00000640648 TRIP4Q15650 581 aaPredicted RBP8.39□□□□□ -1.07
NECAP1-227ENST00000640648 PLCZ1Q86YW0 608 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 TCEAL3Q969E4 200 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 CDRT15Q96T59 188 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 ZSCAN5AQ9BUG6 496 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 LRRC19Q9H756 370 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 GPRC5CQ9NQ84 441 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 BFARQ9NZS9 450 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 XPO7Q9UIA9 1087 aaKnown RBP8.39□□□□□ -1.07
NECAP1-227ENST00000640648 RNF103O00237 685 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 PLD2O14939 933 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 GRAP2O75791 330 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 MPOP05164 745 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 C8BP07358 591 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 GIT2Q14161 759 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 WDR59Q6PJI9 974 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 DPP9Q86TI2 863 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 TRABD2AQ86V40 505 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 ELMO3Q96BJ8 720 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 ELMO2Q96JJ3 720 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 CBWD1Q9BRT8 395 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 MAGEB5Q9BZ81 275 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 TLE6Q9H808 572 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 NYAP2Q9P242 653 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 FBXO40Q9UH90 709 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 MAFFQ9ULX9 164 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 NDUFAF1Q9Y375 327 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 HLA-DRAP01903 254 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 ZNF3P17036 446 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 GDI2P50395 445 aaKnown RBP8.39□□□□□ -1.07
NECAP1-227ENST00000640648 POU5F1BQ06416 359 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 HNRNPDQ14103 355 aaKnown RBP8.39□□□□□ -1.07
NECAP1-227ENST00000640648 DUOXA2Q1HG44 320 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 SWI5Q1ZZU3 235 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 HES5Q5TA89 166 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 SLX4IPQ5VYV7 408 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 ZDHHC13Q8IUH4 622 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 ATP6V0D2Q8N8Y2 350 aa8.39□□□□□ -1.07
NECAP1-227ENST00000640648 RBM15BQ8NDT2 890 aaKnown RBP8.39□□□□□ -1.07
NECAP1-227ENST00000640648 SKA2Q8WVK7 121 aaPredicted RBP8.39□□□□□ -1.07
NECAP1-227ENST00000640648 DNAJA4Q8WW22 397 aaPredicted RBP8.39□□□□□ -1.07
NECAP1-227ENST00000640648 CNDP2Q96KP4 475 aaKnown RBP8.39□□□□□ -1.07
NECAP1-227ENST00000640648 PNMA5Q96PV4 448 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms