RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 TLR1Q15399 786 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 ARL13AQ5H913 290 aaPredicted RBP16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 KDELC2Q7Z4H8 507 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 PTAR1Q7Z6K3 402 aaPredicted RBP16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 ADGRG6Q86SQ4 1221 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 KBTBD6Q86V97 674 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 UNC93AQ86WB7 457 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 OSTM1Q86WC4 334 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 GALNT4Q8N4A0 578 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 APPL2Q8NEU8 664 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 JADE3Q92613 823 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 VPS39Q96JC1 886 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 NAT9Q9BTE0 207 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 MED10Q9BTT4 135 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 COPS7BQ9H9Q2 264 aaPredicted RBP16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 LRRC4Q9HBW1 653 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 ATP6V1B1P15313 513 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 NFKB1P19838 968 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 DBN1Q16643 649 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 TAPT1Q6NXT6 567 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 SLC27A1Q6PCB7 646 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 PAOXQ6QHF9 649 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 PSTKQ8IV42 348 aaKnown RBP16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 CCNYL1Q8N7R7 359 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 ACE2Q9BYF1 805 aaPredicted RBP16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 EIF2B3Q9NR50 452 aaKnown RBP16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 APPL1Q9UKG1 709 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 C15orf38-AP3S2A0A0A6YYH1 394 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 CCDC160A6NGH7 325 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 FLOT2Q14254 428 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 KYAT1Q16773 422 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 ARPINQ7Z6K5 226 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 DSELQ8IZU8 1212 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 SIX6OS1Q8N1H7 587 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 KCTD4Q8WVF5 259 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 TMA16Q96EY4 203 aaKnown RBP16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 CNBD2Q96M20 576 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 KCNK16Q96T55 309 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 MLPHQ9BV36 600 aaPredicted RBP16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 ILKAPQ9H0C8 392 aaPredicted RBP16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 VCX3BQ9H321 246 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 ZDHHC2Q9UIJ5 367 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 CLEC11AQ9Y240 323 aa16.86■□□□□ 0.29
HNRNPU-228ENST00000640306 MYL4P12829 197 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 PMLP29590 882 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 CD68P34810 354 aaPredicted RBP16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 ZBTB6Q15916 424 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 TMC7Q7Z402 723 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 PNPLA1Q8N8W4 532 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 SNX31Q8N9S9 440 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 B3GALNT2Q8NCR0 500 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 ZFAND2BQ8WV99 257 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 EDEM1Q92611 657 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 DCUN1D1Q96GG9 259 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 OCEL1Q9H607 264 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 PIN4Q9Y237 131 aaKnown RBP16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 TIMM13Q9Y5L4 95 aaPredicted RBP16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 SMIM28A0A1B0GU29 152 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 GLTPD2A6NH11 291 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 TOMM70O94826 608 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 AP2A1O95782 977 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 TPI1P60174 286 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 MS4A2Q01362 244 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 USP10Q14694 798 aaKnown RBP16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 OTOP3Q7RTS5 596 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 NT5DC4Q86YG4 428 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 PQLC1Q8N2U9 271 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 RTKNQ9BST9 563 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 FAM96AQ9H5X1 160 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 ZDHHC7Q9NXF8 308 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 IGSF9Q9P2J2 1179 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 LOC285556D6RIA3 1793 aa16.85■□□□□ 0.29
HNRNPU-228ENST00000640306 JCHAINP01591 159 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 ACADSBP45954 432 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 IREB2P48200 963 aaKnown RBP16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 TKTL1P51854 596 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 DPYSQ14117 519 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 CNGA3Q16281 694 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 SEL1L3Q68CR1 1132 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 IYDQ6PHW0 289 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 MAMDC4Q6UXC1 1216 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 CRYBG2Q8N1P7 616 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 LRRC52Q8N7C0 313 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 SUDS3Q9H7L9 328 aaPredicted RBP16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 GTF2IRD1Q9UHL9 959 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 TLK1Q9UKI8 766 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 RUVBL2Q9Y230 463 aaKnown RBP16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 YJEFN3A6XGL0 299 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 DCLK1O15075 740 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 RTN3O95197 1032 aaPredicted RBP16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 CHN2P52757 468 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 CTBP1Q13363 440 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 DCAF4L1Q3SXM0 396 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 TMEM135Q86UB9 458 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 SLC41A1Q8IVJ1 513 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 KYQ8NBH2 561 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 BHLHE22Q8NFJ8 381 aaPredicted RBP16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 SPATA22Q8NHS9 363 aa16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 ZSCAN18Q8TBC5 510 aaPredicted RBP16.84■□□□□ 0.29
HNRNPU-228ENST00000640306 PIP4K2CQ8TBX8 421 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms