RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 PEX11BO96011 259 aa12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 OAS1P00973 400 aaKnown RBP12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 FGBP02675 491 aa12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 HLA-DQB2P05538 268 aa12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 SLC11A2P49281 568 aa12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 HARS2P49590 506 aaKnown RBP12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 EPHB3P54753 998 aa12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 CRYMQ14894 314 aa12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 LRRC14Q15048 493 aa12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 FAM133BQ5BKY9 247 aaKnown RBP12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 NAPEPLDQ6IQ20 393 aa12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 CIR1Q86X95 450 aaPredicted RBP12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 C4orf33Q8N1A6 199 aa12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 MGARPQ8TDB4 240 aa12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 ZNF473Q8WTR7 871 aaKnown RBP12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 CLP1Q92989 425 aaKnown RBP12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 PSMG2Q969U7 264 aa12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 TTC17Q96AE7 1141 aa12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 MYEOVQ96EZ4 313 aa12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 SGSM3Q96HU1 749 aa12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 ZNF317Q96PQ6 595 aaPredicted RBP12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 BFARQ9NZS9 450 aa12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 MKI67P46013 3256 aaKnown RBP12.5□□□□□ -0.41
CACNA1D-228ENST00000638120 AP3B1O00203 1094 aa12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 TYROBPO43914 113 aa12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 RAMP2O60895 175 aa12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 SPAG7O75391 227 aa12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 ANXA9O76027 345 aa12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 YBEYP58557 167 aaPredicted RBP12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 FPGSQ05932 587 aa12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 HNRNPDQ14103 355 aaKnown RBP12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 PARP15Q460N3 678 aa12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 DNAJB7Q7Z6W7 309 aaPredicted RBP12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 LINC00523Q86TU6 105 aa12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 LGI2Q8N0V4 545 aa12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 DNAAF3Q8N9W5 541 aa12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 DYDC1Q8WWB3 177 aa12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 AZIN2Q96A70 460 aa12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 CHMP6Q96FZ7 201 aa12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 RETREG1Q9H6L5 497 aa12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 RBM22Q9NW64 420 aaKnown RBP eCLIP12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 UBP1Q9NZI7 540 aa12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 SAMD15Q9P1V8 674 aa12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 SSX2IPQ9Y2D8 614 aa12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 OBSL1O75147 1896 aa12.49□□□□□ -0.41
CACNA1D-228ENST00000638120 C2orf78A6NCI8 922 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 FAM155BO75949 473 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 NEBLO76041 1014 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 STC2O76061 302 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 POLBP06746 335 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 CNPP09543 421 aaKnown RBP12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 HSPA1AP0DMV8 641 aaKnown RBP12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 HSPA1BP0DMV9 641 aaKnown RBP12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 KRT4P19013 534 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 SLC6A4P31645 630 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 NPY2RP49146 381 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 GEMP55040 296 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 CDH17Q12864 832 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 SPANXN3Q5MJ09 141 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 TTC39BQ5VTQ0 682 aaPredicted RBP12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 FOXR1Q6PIV2 292 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 MARK2Q7KZI7 788 aaKnown RBP12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 ITIH5Q86UX2 942 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 SPATA22Q8NHS9 363 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 BADQ92934 168 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 ALKBH8Q96BT7 664 aaKnown RBP12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 SP110Q9HB58 689 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 PRKAG2Q9UGJ0 569 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 INSL6Q9Y581 213 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 J3KR12 359 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 MT-ND3P03897 115 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 SNRPAP09012 282 aaKnown RBP12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 DRD4P21917 467 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 CA4P22748 312 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 OR1E1P30953 314 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 CORO1AP31146 461 aaKnown RBP12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 GBP2P32456 591 aaPredicted RBP12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 CCT5P48643 541 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 RENBPP51606 427 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 TNK2Q07912 1038 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 NIPAL4Q0D2K0 466 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 NAB1Q13506 487 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 SERINC3Q13530 473 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 FRG1Q14331 258 aaKnown RBP12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 POLD3Q15054 466 aaPredicted RBP12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 ZNF449Q6P9G9 518 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 RFWD3Q6PCD5 774 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 TMEM150AQ86TG1 271 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 DENND1CQ8IV53 801 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 TEX26Q8N6G2 289 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 KLHL23Q8NBE8 558 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 DENND1AQ8TEH3 1009 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 CKAP2Q8WWK9 683 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 CDKL2Q92772 493 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 PRICKLE1Q96MT3 831 aaPredicted RBP12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 TBL1YQ9BQ87 522 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 APOL2Q9BQE5 337 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 KLF16Q9BXK1 252 aaPredicted RBP12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 IL22Q9GZX6 179 aa12.48□□□□□ -0.41
CACNA1D-228ENST00000638120 FAM107BQ9H098 131 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms