RNA–Protein interactions for RNA: ENST00000638099.1

GABRB3-225, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 2,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-225ENST00000638099 SQORQ9Y6N5 450 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 PATJQ8NI35 1801 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 GREB1Q4ZG55 1949 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.05□□□□□ -1.12
GABRB3-225ENST00000638099 KCNU1A8MYU2 1149 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 BUD23O43709 281 aaKnown RBP8.05□□□□□ -1.12
GABRB3-225ENST00000638099 NEBLO76041 1014 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 GJB5O95377 273 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 PRKCGP05129 697 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 POLBP06746 335 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 IRF1P10914 325 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 TARSP26639 723 aaKnown RBP8.05□□□□□ -1.12
GABRB3-225ENST00000638099 CA8P35219 290 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 HCAR3P49019 387 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 AIF1P55008 147 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 NIPAL4Q0D2K0 466 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 SLC10A7Q0GE19 358 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 BFSP2Q13515 415 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 PDE1CQ14123 709 aaPredicted RBP8.05□□□□□ -1.12
GABRB3-225ENST00000638099 SEPT6Q14141 434 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 ZNF460Q14592 562 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 IHHQ14623 411 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 CHI3L2Q15782 390 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 NFE2Q16621 373 aaPredicted RBP8.05□□□□□ -1.12
GABRB3-225ENST00000638099 KCTD11Q693B1 232 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 YTHDF3Q7Z739 585 aaKnown RBP8.05□□□□□ -1.12
GABRB3-225ENST00000638099 STRA8Q7Z7C7 330 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 RNF135Q8IUD6 432 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 TNS4Q8IZW8 715 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 SPATA6LQ8N4H0 392 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 PSMG2Q969U7 264 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 LRRC39Q96DD0 335 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 CERS2Q96G23 380 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 TSSK1BQ9BXA7 367 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 VN1R3Q9BXE9 311 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 FTHL17Q9BXU8 183 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 FRMD8Q9BZ67 464 aaPredicted RBP8.05□□□□□ -1.12
GABRB3-225ENST00000638099 OSBPL2Q9H1P3 480 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 SLC40A1Q9NP59 571 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 FBXO6Q9NRD1 293 aaPredicted RBP8.05□□□□□ -1.12
GABRB3-225ENST00000638099 GKN1Q9NS71 199 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 C20orf96Q9NUD7 363 aaPredicted RBP8.05□□□□□ -1.12
GABRB3-225ENST00000638099 BFARQ9NZS9 450 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 MARCH2Q9P0N8 246 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 FETUBQ9UGM5 382 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 SCML2Q9UQR0 700 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 ATP11BQ9Y2G3 1177 aa8.05□□□□□ -1.12
GABRB3-225ENST00000638099 DOCK6Q96HP0 2047 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 SF3B1O75533 1304 aaKnown RBP eCLIP8.04□□□□□ -1.12
GABRB3-225ENST00000638099 FAM237BA0A1B0GVD1 139 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 A8MUI8 341 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 INPPL1O15357 1258 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 FSBPO95073 299 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 CBX6O95503 412 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 ITGA2BP08514 1039 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 ACVRL1P37023 503 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 MLLT6P55198 1093 aaPredicted RBP8.04□□□□□ -1.12
GABRB3-225ENST00000638099 TMPRSS15P98073 1019 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 CTBP1Q13363 440 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 RASA2Q15283 850 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 EML3Q32P44 896 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 ANKRD20A4Q4UJ75 823 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 N4BP2L1Q5TBK1 243 aaPredicted RBP8.04□□□□□ -1.12
GABRB3-225ENST00000638099 FBXL22Q6P050 247 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 C4orf22Q6V702 233 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 TTC7BQ86TV6 843 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 DENND6AQ8IWF6 608 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 PLD6Q8N2A8 252 aaKnown RBP8.04□□□□□ -1.12
GABRB3-225ENST00000638099 FBXO22Q8NEZ5 403 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 DPF3Q92784 378 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 RPRD1AQ96P16 312 aaPredicted RBP8.04□□□□□ -1.12
GABRB3-225ENST00000638099 KDM4CQ9H3R0 1056 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 TXNDC16Q9P2K2 825 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 IPO11Q9UI26 975 aaKnown RBP8.04□□□□□ -1.12
GABRB3-225ENST00000638099 GGA2Q9UJY4 613 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 STK38LQ9Y2H1 464 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 MTO1Q9Y2Z2 717 aaKnown RBP8.04□□□□□ -1.12
GABRB3-225ENST00000638099 PLLPQ9Y342 182 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 XIRP2A4UGR9 3374 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 ZCWPW2A0A1B0GU75 182 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 TM9SF1O15321 606 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 TLR5O60602 858 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 PIRTP0C851 137 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 CCL5P13501 91 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 TSHRP16473 764 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 FGFR3P22607 806 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 NCALDP61601 193 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 DSC2Q02487 901 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 BST1Q10588 318 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 TTC31Q49AM3 519 aaPredicted RBP8.04□□□□□ -1.12
GABRB3-225ENST00000638099 MANEALQ5VSG8 457 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 FAM219BQ5XKK7 198 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 STEAP4Q687X5 459 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 ESRP1Q6NXG1 681 aaKnown RBP8.04□□□□□ -1.12
GABRB3-225ENST00000638099 ATG14Q6ZNE5 492 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 MTDHQ86UE4 582 aaKnown RBP8.04□□□□□ -1.12
GABRB3-225ENST00000638099 NPAS4Q8IUM7 802 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 DCLK2Q8N568 766 aa8.04□□□□□ -1.12
GABRB3-225ENST00000638099 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.04□□□□□ -1.12
GABRB3-225ENST00000638099 AGR3Q8TD06 166 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms