RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 SLC5A3P53794 718 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 CACNB2Q08289 660 aaPredicted RBP12.35□□□□□ -0.43
CLN8-212ENST00000637083 NFE2Q16621 373 aaPredicted RBP12.35□□□□□ -0.43
CLN8-212ENST00000637083 HSP90AA5PQ58FG0 334 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 FSTL4Q6MZW2 842 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 ALYREFQ86V81 257 aaKnown RBP12.35□□□□□ -0.43
CLN8-212ENST00000637083 URGCPQ8TCY9 931 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 DPF3Q92784 378 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 FUBP3Q96I24 572 aaKnown RBP eCLIP12.35□□□□□ -0.43
CLN8-212ENST00000637083 CELF6Q96J87 481 aaKnown RBP12.35□□□□□ -0.43
CLN8-212ENST00000637083 TBL1YQ9BQ87 522 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 ENTPD7Q9NQZ7 604 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 TMLHEQ9NVH6 421 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 DNAJC28Q9NX36 388 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 TAS2R1Q9NYW7 299 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 TMEM216Q9P0N5 145 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 SLC17A6Q9P2U8 582 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 TLK1Q9UKI8 766 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 DNAJC16Q9Y2G8 782 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 CDY1Q9Y6F8 540 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 TLL2Q9Y6L7 1015 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 NUMBLQ9Y6R0 609 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 BRCA2P51587 3418 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 A0A096LPK6 155 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 CAPN14A8MX76 684 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 PEX11AO75192 247 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 GSRP00390 522 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 PAMP19021 973 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 KCNA4P22459 653 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 ABCE1P61221 599 aaKnown RBP12.35□□□□□ -0.43
CLN8-212ENST00000637083 CERCAMQ5T4B2 595 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 POTEHQ6S545 545 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 ZCCHC23Q6ZST2 131 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 CTU1Q7Z7A3 348 aaKnown RBP12.35□□□□□ -0.43
CLN8-212ENST00000637083 LRRTM3Q86VH5 581 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 C10orf107Q8IVU9 208 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 PPHLN1Q8NEY8 458 aaKnown RBP12.35□□□□□ -0.43
CLN8-212ENST00000637083 C1orf74Q96LT6 269 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 IL12RB2Q99665 862 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 C1orf21Q9H246 121 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 FBXO44Q9H4M3 255 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 MRM3Q9HC36 420 aaKnown RBP12.35□□□□□ -0.43
CLN8-212ENST00000637083 GLOD4Q9HC38 313 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 RGS18Q9NS28 235 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 MARCOQ9UEW3 520 aaPredicted RBP12.35□□□□□ -0.43
CLN8-212ENST00000637083 SNX10Q9Y5X0 201 aa12.35□□□□□ -0.43
CLN8-212ENST00000637083 B2RBV5 119 aa12.34□□□□□ -0.43
CLN8-212ENST00000637083 TMEM189-UBE2V1I3L0A0 370 aa12.34□□□□□ -0.43
CLN8-212ENST00000637083 TNFRSF10BO14763 440 aa12.34□□□□□ -0.43
CLN8-212ENST00000637083 AMHP03971 560 aa12.34□□□□□ -0.43
CLN8-212ENST00000637083 MYCNP04198 464 aaPredicted RBP12.34□□□□□ -0.43
CLN8-212ENST00000637083 COL6A2P12110 1019 aa12.34□□□□□ -0.43
CLN8-212ENST00000637083 IBSPP21815 317 aaPredicted RBP12.34□□□□□ -0.43
CLN8-212ENST00000637083 PGM1P36871 562 aa12.34□□□□□ -0.43
CLN8-212ENST00000637083 HARS2P49590 506 aaKnown RBP12.34□□□□□ -0.43
CLN8-212ENST00000637083 HK2P52789 917 aa12.34□□□□□ -0.43
CLN8-212ENST00000637083 PRKCZQ05513 592 aa12.34□□□□□ -0.43
CLN8-212ENST00000637083 ZRSR2Q15696 482 aaKnown RBP12.34□□□□□ -0.43
CLN8-212ENST00000637083 ACBD5Q5T8D3 534 aaPredicted RBP12.34□□□□□ -0.43
CLN8-212ENST00000637083 PKN3Q6P5Z2 889 aa12.34□□□□□ -0.43
CLN8-212ENST00000637083 RNF180Q86T96 592 aa12.34□□□□□ -0.43
CLN8-212ENST00000637083 ZNF598Q86UK7 904 aaKnown RBP12.34□□□□□ -0.43
CLN8-212ENST00000637083 MON1AQ86VX9 555 aa12.34□□□□□ -0.43
CLN8-212ENST00000637083 ZSCAN18Q8TBC5 510 aaPredicted RBP12.34□□□□□ -0.43
CLN8-212ENST00000637083 HASPINQ8TF76 798 aa12.34□□□□□ -0.43
CLN8-212ENST00000637083 NSMCE1Q8WV22 266 aa12.34□□□□□ -0.43
CLN8-212ENST00000637083 MFSD3Q96ES6 412 aa12.34□□□□□ -0.43
CLN8-212ENST00000637083 MIPEPQ99797 713 aa12.34□□□□□ -0.43
CLN8-212ENST00000637083 CCDC106Q9BWC9 280 aa12.34□□□□□ -0.43
CLN8-212ENST00000637083 DENND2DQ9H6A0 471 aaPredicted RBP12.34□□□□□ -0.43
CLN8-212ENST00000637083 YY1AP1Q9H869 796 aa12.34□□□□□ -0.43
CLN8-212ENST00000637083 CHRAC1Q9NRG0 131 aa12.34□□□□□ -0.43
CLN8-212ENST00000637083 IARS2Q9NSE4 1012 aaKnown RBP12.34□□□□□ -0.43
CLN8-212ENST00000637083 STOML1Q9UBI4 398 aa12.34□□□□□ -0.43
CLN8-212ENST00000637083 C2orf71A6NGG8 1288 aa12.33□□□□□ -0.43
CLN8-212ENST00000637083 VGLL3A8MV65 326 aa12.33□□□□□ -0.43
CLN8-212ENST00000637083 WASH4PA8MWX3 477 aa12.33□□□□□ -0.43
CLN8-212ENST00000637083 DIAPH2O60879 1101 aa12.33□□□□□ -0.43
CLN8-212ENST00000637083 ENO1P06733 434 aaKnown RBP12.33□□□□□ -0.43
CLN8-212ENST00000637083 ASPHQ12797 758 aa12.33□□□□□ -0.43
CLN8-212ENST00000637083 ITGA7Q13683 1181 aa12.33□□□□□ -0.43
CLN8-212ENST00000637083 PPM1JQ5JR12 505 aa12.33□□□□□ -0.43
CLN8-212ENST00000637083 MANEALQ5VSG8 457 aa12.33□□□□□ -0.43
CLN8-212ENST00000637083 CCSAPQ6IQ19 270 aaPredicted RBP12.33□□□□□ -0.43
CLN8-212ENST00000637083 RINLQ6ZS11 566 aa12.33□□□□□ -0.43
CLN8-212ENST00000637083 SLC24A5Q71RS6 500 aa12.33□□□□□ -0.43
CLN8-212ENST00000637083 CLEC14AQ86T13 490 aa12.33□□□□□ -0.43
CLN8-212ENST00000637083 RTL3Q8N8U3 475 aaKnown RBP12.33□□□□□ -0.43
CLN8-212ENST00000637083 ZNF784Q8NCA9 323 aaPredicted RBP12.33□□□□□ -0.43
CLN8-212ENST00000637083 SCAMP5Q8TAC9 235 aa12.33□□□□□ -0.43
CLN8-212ENST00000637083 STMN2Q93045 179 aa12.33□□□□□ -0.43
CLN8-212ENST00000637083 VPS39Q96JC1 886 aa12.33□□□□□ -0.43
CLN8-212ENST00000637083 FCRL2Q96LA5 508 aaPredicted RBP12.33□□□□□ -0.43
CLN8-212ENST00000637083 C8orf48Q96LL4 319 aa12.33□□□□□ -0.43
CLN8-212ENST00000637083 PRKD2Q9BZL6 878 aa12.33□□□□□ -0.43
CLN8-212ENST00000637083 UBE2OQ9C0C9 1292 aaKnown RBP12.33□□□□□ -0.43
CLN8-212ENST00000637083 C20orf27Q9GZN8 174 aa12.33□□□□□ -0.43
CLN8-212ENST00000637083 RHOJQ9H4E5 214 aa12.33□□□□□ -0.43
CLN8-212ENST00000637083 NMRAL1Q9HBL8 299 aa12.33□□□□□ -0.43
CLN8-212ENST00000637083 TBC1D13Q9NVG8 400 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms