RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 SLC25A11Q02978 314 aaKnown RBP11.39□□□□□ -0.59
DDX41-219ENST00000629036 ZNF177Q13360 481 aaPredicted RBP11.39□□□□□ -0.59
DDX41-219ENST00000629036 STARD3Q14849 445 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 N4BP2L1Q5TBK1 243 aaPredicted RBP11.39□□□□□ -0.59
DDX41-219ENST00000629036 PEAR1Q5VY43 1037 aaPredicted RBP11.39□□□□□ -0.59
DDX41-219ENST00000629036 TXNRD3NBQ6F5E7 133 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 ZNF783Q6ZMS7 281 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 SLFN11Q7Z7L1 901 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 TMPRSS6Q8IU80 811 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 SLC41A1Q8IVJ1 513 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 SH2D3CQ8N5H7 860 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 COL26A1Q96A83 441 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 TBC1D31Q96DN5 1066 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 LOXL4Q96JB6 756 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 BTBD6Q96KE9 485 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 KCTD15Q96SI1 283 aaPredicted RBP11.39□□□□□ -0.59
DDX41-219ENST00000629036 FAM129BQ96TA1 746 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 ACE2Q9BYF1 805 aaPredicted RBP11.39□□□□□ -0.59
DDX41-219ENST00000629036 PRDM16Q9HAZ2 1276 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 ITM2CQ9NQX7 267 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 SCINQ9Y6U3 715 aa11.39□□□□□ -0.59
DDX41-219ENST00000629036 TRPM6Q9BX84 2022 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 ANKRD62A6NC57 917 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 K7ERQ8 282 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 SMAD6O43541 496 aaKnown RBP11.38□□□□□ -0.59
DDX41-219ENST00000629036 SRGAP2O75044 1071 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 RHOCP08134 193 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 SRCP12931 536 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 PCK1P35558 622 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 ACVRL1P37023 503 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 PTGER3P43115 390 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 MAPKAPK2P49137 400 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 TPMTP51580 245 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 METAP1P53582 386 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 OXCT1P55809 520 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 GNA12Q03113 381 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 E2F5Q15329 346 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 ARL13BQ3SXY8 428 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 USP39Q53GS9 565 aaKnown RBP11.38□□□□□ -0.59
DDX41-219ENST00000629036 CCDC122Q5T0U0 273 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 SDE2Q6IQ49 451 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 CEP68Q76N32 757 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 CACUL1Q86Y37 369 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 RTL3Q8N8U3 475 aaKnown RBP11.38□□□□□ -0.59
DDX41-219ENST00000629036 ARHGEF2Q92974 986 aaKnown RBP11.38□□□□□ -0.59
DDX41-219ENST00000629036 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.38□□□□□ -0.59
DDX41-219ENST00000629036 NUP85Q9BW27 656 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 TRIM5Q9C035 493 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 RETREG1Q9H6L5 497 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 NHEJ1Q9H9Q4 299 aaPredicted RBP11.38□□□□□ -0.59
DDX41-219ENST00000629036 FBRSQ9HAH7 460 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 SPTLC3Q9NUV7 552 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 BCCIPQ9P287 314 aaKnown RBP eCLIP11.38□□□□□ -0.59
DDX41-219ENST00000629036 MYO1AQ9UBC5 1043 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 SERGEFQ9UGK8 458 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 CYP8B1Q9UNU6 501 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 PLA2G4CQ9UP65 541 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 AP4E1Q9UPM8 1137 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 ACTL7AQ9Y615 435 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 IGF2RP11717 2491 aa11.38□□□□□ -0.59
DDX41-219ENST00000629036 GCN1Q92616 2671 aaKnown RBP11.38□□□□□ -0.59
DDX41-219ENST00000629036 EDDM13A0A1B0GTR0 161 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 BCLAF3A2AJT9 711 aaKnown RBP11.37□□□□□ -0.59
DDX41-219ENST00000629036 TARSL2A2RTX5 802 aaKnown RBP11.37□□□□□ -0.59
DDX41-219ENST00000629036 AKR1B15C9JRZ8 316 aaPredicted RBP11.37□□□□□ -0.59
DDX41-219ENST00000629036 LRP3O75074 770 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 MTA2O94776 668 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 LCA5LO95447 670 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 PMLP29590 882 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 OR1E1P30953 314 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 ARSEP51690 589 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 SULT2A1Q06520 285 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 DPYSQ14117 519 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 DPYSL2Q16555 572 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 EFHC2Q5JST6 749 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 C6orf118Q5T5N4 469 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 AFMIDQ63HM1 303 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 SCYL2Q6P3W7 929 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 KIAA1324Q6UXG2 1013 aaKnown RBP11.37□□□□□ -0.59
DDX41-219ENST00000629036 LRRC31Q6UY01 552 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 PRR23CQ6ZRP0 262 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.37□□□□□ -0.59
DDX41-219ENST00000629036 C11orf74Q86VG3 221 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 VPS36Q86VN1 386 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 CNGA4Q8IV77 575 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 ARHGAP12Q8IWW6 846 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 AADATQ8N5Z0 425 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 NPWQ8N729 165 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 FAM71BQ8TC56 605 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 TSC1Q92574 1164 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 SIPA1Q96FS4 1042 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 LRRC19Q9H756 370 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 MRPL47Q9HD33 250 aaKnown RBP11.37□□□□□ -0.59
DDX41-219ENST00000629036 SEMA4GQ9NTN9 838 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 WSB2Q9NYS7 404 aaPredicted RBP11.37□□□□□ -0.59
DDX41-219ENST00000629036 ANAPC7Q9UJX3 599 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 VPS28Q9UK41 221 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 SARDHQ9UL12 918 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 MFHAS1Q9Y4C4 1052 aa11.37□□□□□ -0.59
DDX41-219ENST00000629036 DSPP15924 2871 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms