RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 TMEM86AQ8N2M4 240 aa17.83■□□□□ 0.44
FAM3A-222ENST00000621967 PDCD7Q8N8D1 485 aaKnown RBP17.83■□□□□ 0.44
FAM3A-222ENST00000621967 CDKL2Q92772 493 aa17.83■□□□□ 0.44
FAM3A-222ENST00000621967 TNIP3Q96KP6 325 aa17.83■□□□□ 0.44
FAM3A-222ENST00000621967 NPY6RQ99463 290 aa17.83■□□□□ 0.44
FAM3A-222ENST00000621967 GPR62Q9BZJ7 368 aa17.83■□□□□ 0.44
FAM3A-222ENST00000621967 STOML1Q9UBI4 398 aa17.83■□□□□ 0.44
FAM3A-222ENST00000621967 PCDHB8Q9UN66 801 aa17.83■□□□□ 0.44
FAM3A-222ENST00000621967 YBX2Q9Y2T7 364 aaKnown RBP17.83■□□□□ 0.44
FAM3A-222ENST00000621967 TIMM13Q9Y5L4 95 aaPredicted RBP17.83■□□□□ 0.44
FAM3A-222ENST00000621967 NUP205Q92621 2012 aa17.83■□□□□ 0.44
FAM3A-222ENST00000621967 MAGEC1O60732 1142 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 GLRA3O75311 464 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 TOP3BO95985 862 aaKnown RBP17.82■□□□□ 0.44
FAM3A-222ENST00000621967 LINC00271P0C7V0 271 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 ATP6V1C1P21283 382 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 WARSP23381 471 aaKnown RBP17.82■□□□□ 0.44
FAM3A-222ENST00000621967 AQP5P55064 265 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 ADIGQ0VDE8 80 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 BLMHQ13867 455 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 KPNB1Q14974 876 aaKnown RBP17.82■□□□□ 0.44
FAM3A-222ENST00000621967 PAFAH1B3Q15102 231 aaKnown RBP17.82■□□□□ 0.44
FAM3A-222ENST00000621967 WSCD1Q658N2 575 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 MBLAC2Q68D91 279 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 OSTM1Q86WC4 334 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 TMPRSS6Q8IU80 811 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 KIRREL3Q8IZU9 778 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 ARHGAP24Q8N264 748 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 B3GALNT2Q8NCR0 500 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 CCDC106Q9BWC9 280 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 DUSP16Q9BY84 665 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 IGSF9Q9P2J2 1179 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 PPARGC1AQ9UBK2 798 aaKnown RBP17.82■□□□□ 0.44
FAM3A-222ENST00000621967 NLRC5Q86WI3 1866 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 SYN3O14994 580 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 FGF18O76093 207 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 SERPINA6P08185 405 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 MGAT1P26572 445 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 NOS2P35228 1153 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 BMPR1AP36894 532 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 ABL2P42684 1182 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 PITX1P78337 314 aaPredicted RBP17.82■□□□□ 0.44
FAM3A-222ENST00000621967 CRADDP78560 199 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 DPYSQ14117 519 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 PDK1Q15118 436 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 FASTKD1Q53R41 847 aaKnown RBP17.82■□□□□ 0.44
FAM3A-222ENST00000621967 CASC4Q6P4E1 433 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 KCTD13Q8WZ19 329 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 C17orf80Q9BSJ5 609 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 PRO3102Q9H379 93 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 SLC17A6Q9P2U8 582 aa17.82■□□□□ 0.44
FAM3A-222ENST00000621967 TPP1O14773 563 aa17.81■□□□□ 0.44
FAM3A-222ENST00000621967 FGF3P11487 239 aaPredicted RBP17.81■□□□□ 0.44
FAM3A-222ENST00000621967 ACADSP16219 412 aa17.81■□□□□ 0.44
FAM3A-222ENST00000621967 TYMPP19971 482 aa17.81■□□□□ 0.44
FAM3A-222ENST00000621967 PSMB4P28070 264 aa17.81■□□□□ 0.44
FAM3A-222ENST00000621967 YWHAHQ04917 246 aaPredicted RBP17.81■□□□□ 0.44
FAM3A-222ENST00000621967 AP1B1Q10567 949 aa17.81■□□□□ 0.44
FAM3A-222ENST00000621967 PDE1CQ14123 709 aaPredicted RBP17.81■□□□□ 0.44
FAM3A-222ENST00000621967 KLHL23Q8NBE8 558 aa17.81■□□□□ 0.44
FAM3A-222ENST00000621967 WDR60Q8WVS4 1066 aa17.81■□□□□ 0.44
FAM3A-222ENST00000621967 FAM149B1Q96BN6 582 aa17.81■□□□□ 0.44
FAM3A-222ENST00000621967 SLC2A13Q96QE2 648 aa17.81■□□□□ 0.44
FAM3A-222ENST00000621967 FERMT1Q9BQL6 677 aa17.81■□□□□ 0.44
FAM3A-222ENST00000621967 STN1Q9H668 368 aaKnown RBP17.81■□□□□ 0.44
FAM3A-222ENST00000621967 TAGLN3Q9UI15 199 aa17.81■□□□□ 0.44
FAM3A-222ENST00000621967 PLA2G4CQ9UP65 541 aa17.81■□□□□ 0.44
FAM3A-222ENST00000621967 SORCS3Q9UPU3 1222 aa17.81■□□□□ 0.44
FAM3A-222ENST00000621967 B2RBV5 119 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 PPP1R12AO14974 1030 aaPredicted RBP17.8■□□□□ 0.44
FAM3A-222ENST00000621967 DCLK1O15075 740 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 PLIN3O60664 434 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 ARHGEF15O94989 841 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 PSMG1O95456 288 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 CYP11A1P05108 521 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 NPR3P17342 541 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 PGM1P36871 562 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 LHX1P48742 406 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 SESN2P58004 480 aaPredicted RBP17.8■□□□□ 0.44
FAM3A-222ENST00000621967 RCN1Q15293 331 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 INSCQ1MX18 579 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 USP41Q3LFD5 358 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 DCAF6Q58WW2 860 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 TEDDM1Q5T9Z0 273 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 N4BP2L1Q5TBK1 243 aaPredicted RBP17.8■□□□□ 0.44
FAM3A-222ENST00000621967 PPP2R2DQ66LE6 453 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 OVOS1Q6IE37 1185 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 KIAA1841Q6NSI8 718 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 ZCCHC23Q6ZST2 131 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 ZNF567Q8N184 647 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 NDRG1Q92597 394 aaKnown RBP17.8■□□□□ 0.44
FAM3A-222ENST00000621967 B3GALT6Q96L58 329 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 ZNF778Q96MU6 729 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 SAMD11Q96NU1 681 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 TTPALQ9BTX7 342 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 NKX2-4Q9H2Z4 354 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 PRDM12Q9H4Q4 367 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 TMPRSS4Q9NRS4 437 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 SYBUQ9NX95 663 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 MARCOQ9UEW3 520 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms