RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 SLC26A2P50443 739 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 SERPINB8P50452 374 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 CEACAM7Q14002 265 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 GRM2Q14416 872 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 LY6KQ17RY6 165 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 STRA8Q7Z7C7 330 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 ANKRD23Q86SG2 305 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 FAM131BQ86XD5 332 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 BRSK2Q8IWQ3 736 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 ACVR1CQ8NER5 493 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 TSPAN14Q8NG11 270 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 CLEC4CQ8WTT0 213 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 AFG1LQ8WV93 481 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 PLEKHG4BQ96PX9 1271 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 CNPY3Q9BT09 278 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 DRC3Q9H069 523 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 IL1RL2Q9HB29 575 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 ZDHHC7Q9NXF8 308 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.09□□□□□ -1.27
NEDD9-216ENST00000620854 ZNF180Q9UJW8 692 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 SLC39A10Q9ULF5 831 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 PIN4Q9Y237 131 aaKnown RBP7.09□□□□□ -1.27
NEDD9-216ENST00000620854 EFR3BQ9Y2G0 817 aa7.09□□□□□ -1.27
NEDD9-216ENST00000620854 NUP205Q92621 2012 aa7.09□□□□□ -1.28
NEDD9-216ENST00000620854 FAM159BA6NKW6 160 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-216ENST00000620854 HUS1O60921 280 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 E2F6O75461 281 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 RNASEH2AO75792 299 aaKnown RBP7.08□□□□□ -1.28
NEDD9-216ENST00000620854 FBXO21O94952 628 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 CTSHP09668 335 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 MCF2P10911 925 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 PTPN7P35236 360 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 NAMPTP43490 491 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 KPNA2P52292 529 aaKnown RBP7.08□□□□□ -1.28
NEDD9-216ENST00000620854 ZNF143P52747 638 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-216ENST00000620854 NAA20P61599 178 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 LSM12Q3MHD2 195 aaKnown RBP7.08□□□□□ -1.28
NEDD9-216ENST00000620854 ARL13BQ3SXY8 428 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 MTX3Q5HYI7 312 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 TREML2Q5T2D2 321 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 FAM91A1Q658Y4 838 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 LRRC8EQ6NSJ5 796 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 ABHD15Q6UXT9 468 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 RPS27LQ71UM5 84 aaKnown RBP7.08□□□□□ -1.28
NEDD9-216ENST00000620854 ZNF534Q76KX8 674 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 CLVS1Q8IUQ0 354 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-216ENST00000620854 ZNF513Q8N8E2 541 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-216ENST00000620854 COLGALT1Q8NBJ5 622 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 SLC4A11Q8NBS3 891 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 BEST2Q8NFU1 509 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 LRTOMTQ8WZ04 291 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 ZNF669Q96BR6 464 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-216ENST00000620854 GLT1D1Q96MS3 346 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 COQ10BQ9H8M1 238 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 WDR41Q9HAD4 459 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 PCDH18Q9HCL0 1135 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 PDLIM7Q9NR12 457 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 PRMT7Q9NVM4 692 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-216ENST00000620854 SYBUQ9NX95 663 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 RRN3Q9NYV6 651 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 NDUFA13Q9P0J0 144 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 SUN2Q9UH99 717 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 TSPAN16Q9UKR8 245 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 CNTN6Q9UQ52 1028 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 A0A096LPK6 155 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 THRAP10827 490 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 SERPINB9P50453 376 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 NME5P56597 212 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 OGFRL1Q5TC84 451 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-216ENST00000620854 ADGRG6Q86SQ4 1221 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 ACOT1Q86TX2 421 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 WDR49Q8IV35 697 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 UBR7Q8N806 425 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 PNPLA1Q8N8W4 532 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 NCLNQ969V3 563 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 KLHL32Q96NJ5 620 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 APBA2Q99767 749 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 PAIP1Q9H074 479 aaKnown RBP7.08□□□□□ -1.28
NEDD9-216ENST00000620854 XYLT2Q9H1B5 865 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 TASP1Q9H6P5 420 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 NOL11Q9H8H0 719 aaKnown RBP7.08□□□□□ -1.28
NEDD9-216ENST00000620854 VTA1Q9NP79 307 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 SNX15Q9NRS6 342 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 DCDC2Q9UHG0 476 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 PCDHA11Q9Y5I1 949 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 TRIP11Q15643 1979 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 FAM149AA5PLN7 773 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 HCRTO43612 131 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 PIGNO95427 931 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 CDH2P19022 906 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-216ENST00000620854 DPP6P42658 865 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 GPD2P43304 727 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 NDST1P52848 882 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 PMF1Q6P1K2 205 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 LBX2Q6XYB7 198 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 CHST15Q7LFX5 561 aaPredicted RBP7.08□□□□□ -1.28
NEDD9-216ENST00000620854 RNF180Q86T96 592 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 ZNF410Q86VK4 478 aa7.08□□□□□ -1.28
NEDD9-216ENST00000620854 OR52K1Q8NGK4 314 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms