RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 MGAT1P26572 445 aa12.97□□□□□ -0.33
TNFAIP3-209ENST00000619035 OR1E1P30953 314 aa12.97□□□□□ -0.33
TNFAIP3-209ENST00000619035 CORO1AP31146 461 aaKnown RBP12.97□□□□□ -0.33
TNFAIP3-209ENST00000619035 ZKSCAN8Q15776 578 aaPredicted RBP12.97□□□□□ -0.33
TNFAIP3-209ENST00000619035 KLHL38Q2WGJ6 581 aa12.97□□□□□ -0.33
TNFAIP3-209ENST00000619035 PLPP4Q5VZY2 271 aa12.97□□□□□ -0.33
TNFAIP3-209ENST00000619035 RTL10Q7L3V2 364 aa12.97□□□□□ -0.33
TNFAIP3-209ENST00000619035 PRPF39Q86UA1 669 aaKnown RBP12.97□□□□□ -0.33
TNFAIP3-209ENST00000619035 ITIH5Q86UX2 942 aa12.97□□□□□ -0.33
TNFAIP3-209ENST00000619035 CNTD1Q8N815 330 aa12.97□□□□□ -0.33
TNFAIP3-209ENST00000619035 SIGLEC10Q96LC7 697 aa12.97□□□□□ -0.33
TNFAIP3-209ENST00000619035 TSGA13Q96PP4 275 aa12.97□□□□□ -0.33
TNFAIP3-209ENST00000619035 CYP2S1Q96SQ9 504 aa12.97□□□□□ -0.33
TNFAIP3-209ENST00000619035 PAFAH2Q99487 392 aa12.97□□□□□ -0.33
TNFAIP3-209ENST00000619035 ELAC2Q9BQ52 826 aaKnown RBP12.97□□□□□ -0.33
TNFAIP3-209ENST00000619035 APOL2Q9BQE5 337 aa12.97□□□□□ -0.33
TNFAIP3-209ENST00000619035 GOLGA8RI6L899 631 aa12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 MATN3O15232 486 aa12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 LRG1P02750 347 aa12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 ADH1AP07327 375 aa12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 MBL2P11226 248 aaPredicted RBP12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 SLC6A4P31645 630 aa12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 ERVFC1P60507 584 aa12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 UBE3AQ05086 875 aa12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 KBTBD12Q3ZCT8 623 aa12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 RNF187Q5TA31 235 aaPredicted RBP12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 AFMIDQ63HM1 303 aa12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 TIGD7Q6NT04 549 aaPredicted RBP12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 LRRC8BQ6P9F7 803 aa12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 UMODL1-AS1Q8N2C9 162 aa12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 RIBC1Q8N443 379 aaPredicted RBP12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 DNAAF3Q8N9W5 541 aa12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 OR52K1Q8NGK4 314 aa12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 ZSCAN18Q8TBC5 510 aaPredicted RBP12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 DPF3Q92784 378 aa12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 LRRC39Q96DD0 335 aa12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 PABPC5Q96DU9 382 aaKnown RBP12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 ZNF419Q96HQ0 510 aaPredicted RBP12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 CYTH2Q99418 400 aa12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 EBNA1BP2Q99848 306 aaKnown RBP12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 MLPHQ9BV36 600 aaPredicted RBP12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 C12orf65Q9H3J6 166 aaKnown RBP12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 PSMC3IPQ9P2W1 217 aaPredicted RBP12.96□□□□□ -0.33
TNFAIP3-209ENST00000619035 SPAG6O75602 509 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 FAM155BO75949 473 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 STC2O76061 302 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 AP2A1O95782 977 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 OAS1P00973 400 aaKnown RBP12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 TSHRP16473 764 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 BMPR1AP36894 532 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 MSH2P43246 934 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 NDST2P52849 883 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 WDR4P57081 412 aaKnown RBP12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 CORO7P57737 925 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 PRPSAP1Q14558 356 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 SPRED3Q2MJR0 410 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 FAM133BQ5BKY9 247 aaKnown RBP12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 UNC5AQ6ZN44 842 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 SPRED2Q7Z698 418 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 TMEM150AQ86TG1 271 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 TDRPQ86YL5 185 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 CTAGE3PQ8IX95 158 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 SPATA22Q8NHS9 363 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 AZIN2Q96A70 460 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 PLD4Q96BZ4 506 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 STAMBPL1Q96FJ0 436 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 SP110Q9HB58 689 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 PLAC1Q9HBJ0 212 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 PLXNA4Q9HCM2 1894 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 FGFR1OP2Q9NVK5 253 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 RBM22Q9NW64 420 aaKnown RBP eCLIP12.96□□□□□ -0.342e-9■■■■■ 44.3
TNFAIP3-209ENST00000619035 NYNRINQ9P2P1 1898 aaKnown RBP12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 SLC24A2Q9UI40 661 aa12.96□□□□□ -0.34
TNFAIP3-209ENST00000619035 SDR42E2A6NKP2 422 aa12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 DRGXA6NNA5 263 aa12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 HIDE1A8MVS5 230 aa12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 J3KR12 359 aa12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 RAMP2O60895 175 aa12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 KLKB1P03952 638 aa12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 C8AP07357 584 aa12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 MLNP12872 115 aa12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 STX2P32856 288 aa12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 RPA3P35244 121 aaPredicted RBP12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 CYP4F8P98187 520 aa12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 POLD3Q15054 466 aaPredicted RBP12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 SMAD1Q15797 465 aaKnown RBP12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 PABPC1LQ4VXU2 614 aaKnown RBP12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 GKAP1Q5VSY0 366 aaPredicted RBP12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 TXNDC8Q6A555 127 aa12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 CCDC149Q6ZUS6 474 aa12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 CACNA2D3Q8IZS8 1091 aa12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 MICAL1Q8TDZ2 1067 aa12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 DCAKDQ8WVC6 231 aa12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 OXNAD1Q96HP4 312 aaPredicted RBP12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 KLHL5Q96PQ7 755 aa12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 SLC22A12Q96S37 553 aa12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 LBHD1Q9BQE6 289 aaPredicted RBP12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 C17orf80Q9BSJ5 609 aa12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 EMILIN2Q9BXX0 1053 aa12.95□□□□□ -0.34
TNFAIP3-209ENST00000619035 CCDC134Q9H6E4 229 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms