RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 SLC16A10Q8TF71 515 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 TCF12Q99081 682 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 SYT15Q9BQS2 421 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 KATNAL1Q9BW62 490 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 PCDH12Q9NPG4 1184 aa3.11□□□□□ -1.91
LPP-221ENST00000618621 RIMBP3CA6NJZ7 1639 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 RIMBP3BA6NNM3 1639 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 RIMBP3Q9UFD9 1639 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 NR5A2O00482 541 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 CREB1P16220 341 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 ZNF12P17014 697 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 ZNF618Q5T7W0 954 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 FAXCQ5TGI0 409 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 TTC7BQ86TV6 843 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 EPS8L1Q8TE68 723 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 FAM172AQ8WUF8 416 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 NMRK2Q9NPI5 230 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 WDR37Q9Y2I8 494 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 CNTNAP4Q9C0A0 1308 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 FAM237BA0A1B0GVD1 139 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 CYBBP04839 570 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 CETPP11597 493 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 CCNA2P20248 432 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 IL12AP29459 219 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 NDST1P52848 882 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 TGM3Q08188 693 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 EPS8Q12929 822 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 SLC35G1Q2M3R5 365 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 ANKS1BQ7Z6G8 1248 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 CLNKQ7Z7G1 428 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 ANKRD13BQ86YJ7 626 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 CNTD1Q8N815 330 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 CDC26Q8NHZ8 85 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 FNIP1Q8TF40 1166 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 PABPC5Q96DU9 382 aaKnown RBP3.1□□□□□ -1.91
LPP-221ENST00000618621 NMUR2Q9GZQ4 415 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 ISG20L2Q9H9L3 353 aaKnown RBP3.1□□□□□ -1.91
LPP-221ENST00000618621 EXOSC4Q9NPD3 245 aaKnown RBP3.1□□□□□ -1.91
LPP-221ENST00000618621 PIN4Q9Y237 131 aaKnown RBP3.1□□□□□ -1.91
LPP-221ENST00000618621 TLL2Q9Y6L7 1015 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 RNF17Q9BXT8 1623 aaKnown RBP3.1□□□□□ -1.91
LPP-221ENST00000618621 A0A0A0MRY4 1105 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 ASNA1O43681 348 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 MLH1P40692 756 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 TNK2Q07912 1038 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 EIF2B5Q13144 721 aaKnown RBP3.1□□□□□ -1.91
LPP-221ENST00000618621 CELF3Q5SZQ8 465 aaKnown RBP3.1□□□□□ -1.91
LPP-221ENST00000618621 ZPBP2Q6X784 338 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 KRT73Q86Y46 540 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 ERO1BQ86YB8 467 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 BLOC1S5Q8TDH9 187 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 FIG4Q92562 907 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 ATG4CQ96DT6 458 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 SPATA13Q96N96 652 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 COQ7Q99807 217 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 CRNNQ9UBG3 495 aaPredicted RBP3.1□□□□□ -1.91
LPP-221ENST00000618621 SNX6Q9UNH7 406 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 CNOT1A5YKK6 2376 aaKnown RBP3.1□□□□□ -1.91
LPP-221ENST00000618621 DLC1Q96QB1 1528 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 PTGES3LE9PB15 166 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 GRIN3BO60391 1043 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 OCM2P0CE71 109 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 OCMP0CE72 109 aaPredicted RBP3.1□□□□□ -1.91
LPP-221ENST00000618621 ODC1P11926 461 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 SSTR1P30872 391 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 ELK3P41970 407 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 SLC18A1P54219 525 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 PTPN11Q06124 597 aaPredicted RBP3.1□□□□□ -1.91
LPP-221ENST00000618621 GTF2H3Q13889 308 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 PPP1R15BQ5SWA1 713 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 UNC5BQ8IZJ1 945 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 OR8H2Q8N162 312 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 ATG16L2Q8NAA4 619 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 FNDC5Q8NAU1 212 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 RTFDC1Q9BY42 306 aaPredicted RBP3.1□□□□□ -1.91
LPP-221ENST00000618621 ZDHHC18Q9NUE0 388 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 FAM49BQ9NUQ9 324 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 USE1Q9NZ43 259 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 GPRC5DQ9NZD1 345 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.1□□□□□ -1.91
LPP-221ENST00000618621 ZNF180Q9UJW8 692 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 KLHL20Q9Y2M5 609 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 RPTORQ8N122 1335 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 C15orf38-AP3S2A0A0A6YYH1 394 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.1□□□□□ -1.91
LPP-221ENST00000618621 VWA5AO00534 786 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 INPP4BO15327 924 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 GJB6O95452 261 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 C6orf222P0C671 652 aaPredicted RBP3.1□□□□□ -1.91
LPP-221ENST00000618621 CCNB1P14635 433 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 GSTM5P46439 218 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 BST1Q10588 318 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 C2CD6Q53TS8 623 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 ARPINQ7Z6K5 226 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 ACOT1Q86TX2 421 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 CYP4Z2PQ8N1L4 340 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 ANKRD52Q8NB46 1076 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 OR6Y1Q8NGX8 325 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 SEMA4DQ92854 862 aa3.1□□□□□ -1.91
LPP-221ENST00000618621 GOLGA2P5Q9HBQ8 144 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms