RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 HOXC13P31276 330 aa25.9■■□□□ 1.74
VEGFC-202ENST00000618562 BTG3Q14201 252 aaPredicted RBP25.9■■□□□ 1.74
VEGFC-202ENST00000618562 RWDD4Q6NW29 188 aaKnown RBP25.9■■□□□ 1.74
VEGFC-202ENST00000618562 CLNKQ7Z7G1 428 aa25.9■■□□□ 1.74
VEGFC-202ENST00000618562 CEP41Q9BYV8 373 aa25.9■■□□□ 1.74
VEGFC-202ENST00000618562 ALG13Q9NP73 1137 aaKnown RBP25.9■■□□□ 1.74
VEGFC-202ENST00000618562 LNPEPQ9UIQ6 1025 aa25.9■■□□□ 1.74
VEGFC-202ENST00000618562 PLLPQ9Y342 182 aa25.9■■□□□ 1.74
VEGFC-202ENST00000618562 SHROOM3Q8TF72 1996 aa25.9■■□□□ 1.74
VEGFC-202ENST00000618562 NCAM2O15394 837 aa25.89■■□□□ 1.74
VEGFC-202ENST00000618562 RFPL1O75677 317 aa25.89■■□□□ 1.74
VEGFC-202ENST00000618562 NEFHP12036 1026 aa25.89■■□□□ 1.74
VEGFC-202ENST00000618562 PSEN1P49768 467 aa25.89■■□□□ 1.74
VEGFC-202ENST00000618562 C1QTNF8P60827 252 aa25.89■■□□□ 1.74
VEGFC-202ENST00000618562 PPIDQ08752 370 aaKnown RBP25.89■■□□□ 1.74
VEGFC-202ENST00000618562 GALNT2Q10471 571 aa25.89■■□□□ 1.74
VEGFC-202ENST00000618562 EFEMP1Q12805 493 aa25.89■■□□□ 1.74
VEGFC-202ENST00000618562 OVGP1Q12889 678 aa25.89■■□□□ 1.74
VEGFC-202ENST00000618562 CMTR2Q8IYT2 770 aaKnown RBP25.89■■□□□ 1.74
VEGFC-202ENST00000618562 SLC7A6OSQ96CW6 309 aaPredicted RBP25.89■■□□□ 1.74
VEGFC-202ENST00000618562 EBF2Q9HAK2 575 aa25.89■■□□□ 1.74
VEGFC-202ENST00000618562 SEPT10Q9P0V9 454 aa25.89■■□□□ 1.74
VEGFC-202ENST00000618562 DCTN4Q9UJW0 460 aa25.89■■□□□ 1.74
VEGFC-202ENST00000618562 MTO1Q9Y2Z2 717 aaKnown RBP25.89■■□□□ 1.74
VEGFC-202ENST00000618562 HS3ST4Q9Y661 456 aa25.89■■□□□ 1.74
VEGFC-202ENST00000618562 OPHN1O60890 802 aa25.89■■□□□ 1.73
VEGFC-202ENST00000618562 CSH1P0DML2 217 aa25.89■■□□□ 1.73
VEGFC-202ENST00000618562 CSH2P0DML3 217 aa25.89■■□□□ 1.73
VEGFC-202ENST00000618562 SERPINB6P35237 376 aa25.89■■□□□ 1.73
VEGFC-202ENST00000618562 MTDHQ86UE4 582 aaKnown RBP25.89■■□□□ 1.73
VEGFC-202ENST00000618562 TMEM199Q8N511 208 aa25.89■■□□□ 1.73
VEGFC-202ENST00000618562 HDAC11Q96DB2 347 aa25.89■■□□□ 1.73
VEGFC-202ENST00000618562 TMEM169Q96HH4 297 aa25.89■■□□□ 1.73
VEGFC-202ENST00000618562 EIF2B3Q9NR50 452 aaKnown RBP25.89■■□□□ 1.73
VEGFC-202ENST00000618562 KIAA1671Q9BY89 1806 aa25.88■■□□□ 1.73
VEGFC-202ENST00000618562 A8MUI8 341 aa25.88■■□□□ 1.73
VEGFC-202ENST00000618562 KCNK1O00180 336 aa25.88■■□□□ 1.73
VEGFC-202ENST00000618562 EFCAB14O75071 495 aa25.88■■□□□ 1.73
VEGFC-202ENST00000618562 STK10O94804 968 aaKnown RBP25.88■■□□□ 1.73
VEGFC-202ENST00000618562 ZDHHC11BP0C7U3 371 aa25.88■■□□□ 1.73
VEGFC-202ENST00000618562 BGNP21810 368 aa25.88■■□□□ 1.73
VEGFC-202ENST00000618562 CNTFP26441 200 aa25.88■■□□□ 1.73
VEGFC-202ENST00000618562 TBX4P57082 545 aa25.88■■□□□ 1.73
VEGFC-202ENST00000618562 DSG1Q02413 1049 aa25.88■■□□□ 1.73
VEGFC-202ENST00000618562 STEAP4Q687X5 459 aa25.88■■□□□ 1.73
VEGFC-202ENST00000618562 ZNF567Q8N184 647 aa25.88■■□□□ 1.73
VEGFC-202ENST00000618562 COLGALT1Q8NBJ5 622 aa25.88■■□□□ 1.73
VEGFC-202ENST00000618562 FERMT1Q9BQL6 677 aa25.88■■□□□ 1.73
VEGFC-202ENST00000618562 TTLL2Q9BWV7 592 aa25.88■■□□□ 1.73
VEGFC-202ENST00000618562 DNAJC6O75061 913 aa25.87■■□□□ 1.73
VEGFC-202ENST00000618562 HTR7P34969 479 aa25.87■■□□□ 1.73
VEGFC-202ENST00000618562 GARSP41250 739 aaKnown RBP25.87■■□□□ 1.73
VEGFC-202ENST00000618562 ARFIP2P53365 341 aa25.87■■□□□ 1.73
VEGFC-202ENST00000618562 CTC1Q2NKJ3 1217 aa25.87■■□□□ 1.73
VEGFC-202ENST00000618562 PIK3R6Q5UE93 754 aa25.87■■□□□ 1.73
VEGFC-202ENST00000618562 MPP5Q8N3R9 675 aa25.87■■□□□ 1.73
VEGFC-202ENST00000618562 DEPDC1BQ8WUY9 529 aa25.87■■□□□ 1.73
VEGFC-202ENST00000618562 CELF6Q96J87 481 aaKnown RBP25.87■■□□□ 1.73
VEGFC-202ENST00000618562 TUBB6Q9BUF5 446 aa25.87■■□□□ 1.73
VEGFC-202ENST00000618562 AFF4Q9UHB7 1163 aaKnown RBP25.87■■□□□ 1.73
VEGFC-202ENST00000618562 MCM8Q9UJA3 840 aa25.87■■□□□ 1.73
VEGFC-202ENST00000618562 MAGED2Q9UNF1 606 aaPredicted RBP25.87■■□□□ 1.73
VEGFC-202ENST00000618562 EPB41L3Q9Y2J2 1087 aaPredicted RBP25.87■■□□□ 1.73
VEGFC-202ENST00000618562 A0A0G2JND7 137 aa25.87■■□□□ 1.73
VEGFC-202ENST00000618562 SEC24AO95486 1093 aa25.87■■□□□ 1.73
VEGFC-202ENST00000618562 LAG3P18627 525 aa25.87■■□□□ 1.73
VEGFC-202ENST00000618562 MX2P20592 715 aa25.87■■□□□ 1.73
VEGFC-202ENST00000618562 NRG1Q02297 640 aaPredicted RBP25.87■■□□□ 1.73
VEGFC-202ENST00000618562 ZNF449Q6P9G9 518 aa25.87■■□□□ 1.73
VEGFC-202ENST00000618562 CDHR3Q6ZTQ4 885 aa25.87■■□□□ 1.73
VEGFC-202ENST00000618562 C14orf80Q86SX3 495 aa25.87■■□□□ 1.73
VEGFC-202ENST00000618562 HERC2P3Q9BVR0 1158 aa25.87■■□□□ 1.73
VEGFC-202ENST00000618562 OLA1Q9NTK5 396 aaKnown RBP25.87■■□□□ 1.73
VEGFC-202ENST00000618562 MOCS1Q9NZB8 636 aa25.87■■□□□ 1.73
VEGFC-202ENST00000618562 F5H423 210 aaPredicted RBP25.86■■□□□ 1.73
VEGFC-202ENST00000618562 ABLIM3O94929 683 aa25.86■■□□□ 1.73
VEGFC-202ENST00000618562 DLDP09622 509 aaKnown RBP25.86■■□□□ 1.73
VEGFC-202ENST00000618562 SLC2A3P11169 496 aa25.86■■□□□ 1.73
VEGFC-202ENST00000618562 TUFMP49411 452 aaKnown RBP25.86■■□□□ 1.73
VEGFC-202ENST00000618562 MLLT6P55198 1093 aaPredicted RBP25.86■■□□□ 1.73
VEGFC-202ENST00000618562 C10orf120Q5SQS8 335 aa25.86■■□□□ 1.73
VEGFC-202ENST00000618562 TRMT10BQ6PF06 316 aaKnown RBP25.86■■□□□ 1.73
VEGFC-202ENST00000618562 OTOP2Q7RTS6 562 aa25.86■■□□□ 1.73
VEGFC-202ENST00000618562 MIB1Q86YT6 1006 aa25.86■■□□□ 1.73
VEGFC-202ENST00000618562 ZNF461Q8TAF7 563 aa25.86■■□□□ 1.73
VEGFC-202ENST00000618562 RAB3IL1Q8TBN0 382 aa25.86■■□□□ 1.73
VEGFC-202ENST00000618562 STAMBPL1Q96FJ0 436 aa25.86■■□□□ 1.73
VEGFC-202ENST00000618562 BRD8Q9H0E9 1235 aa25.86■■□□□ 1.73
VEGFC-202ENST00000618562 KCNK13Q9HB14 408 aa25.86■■□□□ 1.73
VEGFC-202ENST00000618562 MARCH2Q9P0N8 246 aa25.86■■□□□ 1.73
VEGFC-202ENST00000618562 E9PAM4 449 aa25.86■■□□□ 1.73
VEGFC-202ENST00000618562 FGF10O15520 208 aaPredicted RBP25.86■■□□□ 1.73
VEGFC-202ENST00000618562 ZNF189O75820 626 aaPredicted RBP25.86■■□□□ 1.73
VEGFC-202ENST00000618562 ALDH1A2O94788 518 aa25.86■■□□□ 1.73
VEGFC-202ENST00000618562 CBX6O95503 412 aa25.86■■□□□ 1.73
VEGFC-202ENST00000618562 PTPN3P26045 913 aa25.86■■□□□ 1.73
VEGFC-202ENST00000618562 PTPN4P29074 926 aa25.86■■□□□ 1.73
VEGFC-202ENST00000618562 TRIP4Q15650 581 aaPredicted RBP25.86■■□□□ 1.73
VEGFC-202ENST00000618562 TIFABQ6ZNK6 161 aa25.86■■□□□ 1.73
VEGFC-202ENST00000618562 OXNAD1Q96HP4 312 aaPredicted RBP25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms