RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 DARSP14868 501 aaKnown RBP4.41□□□□□ -1.7
SEC22B-202ENST00000618538 GNL1P36915 607 aaPredicted RBP4.41□□□□□ -1.7
SEC22B-202ENST00000618538 FDFT1P37268 417 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 ADAM17P78536 824 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 MRPS35P82673 323 aaKnown RBP4.41□□□□□ -1.7
SEC22B-202ENST00000618538 KLC1Q07866 573 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 NME3Q13232 169 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 ITGA9Q13797 1035 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 CCDC6Q16204 474 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 KYAT1Q16773 422 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 TSNAXIP1Q2TAA8 658 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.41□□□□□ -1.72e-13■□□□□ 9.4
SEC22B-202ENST00000618538 TRMT5Q32P41 509 aaKnown RBP4.41□□□□□ -1.7
SEC22B-202ENST00000618538 SFT2D3Q587I9 215 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 XKR4Q5GH76 650 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 PPM1LQ5SGD2 360 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 STXBP5Q5T5C0 1151 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 LGSNQ5TDP6 509 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 FSTL4Q6MZW2 842 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 IZUMO2Q6UXV1 221 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 CATSPER4Q7RTX7 472 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 TMEM135Q86UB9 458 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 RASSF3Q86WH2 238 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 CCNJLQ8IV13 435 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 MFSD6LQ8IWD5 586 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 TTC39CQ8N584 583 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 B3GALNT2Q8NCR0 500 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 C3orf58Q8NDZ4 430 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 BEST2Q8NFU1 509 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 CFAP61Q8NHU2 1237 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 NPLOC4Q8TAT6 608 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 SLC7A14Q8TBB6 771 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 ACMSDQ8TDX5 336 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 ZNF483Q8TF39 744 aaPredicted RBP4.41□□□□□ -1.7
SEC22B-202ENST00000618538 FAM149B1Q96BN6 582 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 DCPSQ96C86 337 aaKnown RBP4.41□□□□□ -1.7
SEC22B-202ENST00000618538 RILPQ96NA2 401 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 AGAP3Q96P47 875 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 OR52B2Q96RD2 323 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 TUBGCP5Q96RT8 1024 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 MPHOSPH6Q99547 160 aaKnown RBP4.41□□□□□ -1.7
SEC22B-202ENST00000618538 TTC1Q99614 292 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 ZNF184Q99676 751 aaPredicted RBP4.41□□□□□ -1.7
SEC22B-202ENST00000618538 RBBP8Q99708 897 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 TUBB6Q9BUF5 446 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 C1orf21Q9H246 121 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 CRTAC1Q9NQ79 661 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 DDX43Q9NXZ2 648 aaKnown RBP4.41□□□□□ -1.7
SEC22B-202ENST00000618538 IGSF9Q9P2J2 1179 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 ADAMTS6Q9UKP5 1117 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 PACSIN3Q9UKS6 424 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 RPS6KL1Q9Y6S9 549 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 SHROOM3Q8TF72 1996 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 NUP205Q92621 2012 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 FNDC1Q4ZHG4 1894 aaPredicted RBP4.41□□□□□ -1.7
SEC22B-202ENST00000618538 MBLAC1A4D2B0 266 aaPredicted RBP4.41□□□□□ -1.7
SEC22B-202ENST00000618538 HHLA1C9JL84 531 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 CCNT2O60583 730 aaKnown RBP4.41□□□□□ -1.7
SEC22B-202ENST00000618538 AP2A1O95782 977 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 F2P00734 622 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 UBTFL6P0CB48 400 aaPredicted RBP4.41□□□□□ -1.7
SEC22B-202ENST00000618538 RALBP11234 206 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 ZFXP17010 805 aaPredicted RBP4.41□□□□□ -1.7
SEC22B-202ENST00000618538 NPR3P17342 541 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 TPH1P17752 444 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 ERCC2P18074 760 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 CYP2B6P20813 491 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 MPSTP25325 297 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 CNTFP26441 200 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 PEX2P28328 305 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 GABRB3P28472 473 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 CRABP2P29373 138 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 GP5P40197 560 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 ARL4AP40617 200 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 GRIA2P42262 883 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 DPP6P42658 865 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 NUMBP49757 651 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 LIMK2P53671 638 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 MAP3K7CLP57077 242 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 INHBEP58166 350 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 LILRA4P59901 499 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 ABCE1P61221 599 aaKnown RBP4.41□□□□□ -1.7
SEC22B-202ENST00000618538 NSUN2Q08J23 767 aaKnown RBP eCLIP4.41□□□□□ -1.7
SEC22B-202ENST00000618538 LBRQ14739 615 aaKnown RBP4.41□□□□□ -1.7
SEC22B-202ENST00000618538 SNX17Q15036 470 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 DUSP28Q4G0W2 176 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 HSP90AA5PQ58FG0 334 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 PRAMEF19Q5SWL8 479 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 LDLRAD1Q5T700 205 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 THEMIS2Q5TEJ8 643 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 TMCO4Q5TGY1 634 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 C1orf146Q5VVC0 180 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 LPCAT4Q643R3 524 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 WSCD1Q658N2 575 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 PDPK2PQ6A1A2 396 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 C4orf22Q6V702 233 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 ARHGAP36Q6ZRI8 547 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 HPS6Q86YV9 775 aa4.41□□□□□ -1.7
SEC22B-202ENST00000618538 WDR75Q8IWA0 830 aaKnown RBP4.41□□□□□ -1.7
SEC22B-202ENST00000618538 TRIM42Q8IWZ5 723 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms