RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 RASSF3Q86WH2 238 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 UMODL1-AS1Q8N2C9 162 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 LRRC8CQ8TDW0 803 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 CDKL2Q92772 493 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 TOP1MTQ969P6 601 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 MTBPQ96DY7 904 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 MYEOVQ96EZ4 313 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 FAM111AQ96PZ2 611 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 PITPNM3Q9BZ71 974 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 SLCO1B3Q9NPD5 702 aa17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 RBM22Q9NW64 420 aaKnown RBP eCLIP17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 USP15Q9Y4E8 981 aaPredicted RBP17.69■□□□□ 0.42
PCDHGC3-205ENST00000617641 COPEO14579 308 aa17.68■□□□□ 0.42
PCDHGC3-205ENST00000617641 CHRM1P11229 460 aaPredicted RBP17.68■□□□□ 0.42
PCDHGC3-205ENST00000617641 ITGB8P26012 769 aa17.68■□□□□ 0.42
PCDHGC3-205ENST00000617641 TUFMP49411 452 aaKnown RBP17.68■□□□□ 0.42
PCDHGC3-205ENST00000617641 KCNQ1P51787 676 aa17.68■□□□□ 0.42
PCDHGC3-205ENST00000617641 MGAT5Q09328 741 aa17.68■□□□□ 0.42
PCDHGC3-205ENST00000617641 NAPEPLDQ6IQ20 393 aa17.68■□□□□ 0.42
PCDHGC3-205ENST00000617641 PACS1Q6VY07 963 aa17.68■□□□□ 0.42
PCDHGC3-205ENST00000617641 RGS9BPQ6ZS82 235 aa17.68■□□□□ 0.42
PCDHGC3-205ENST00000617641 CDHR3Q6ZTQ4 885 aa17.68■□□□□ 0.42
PCDHGC3-205ENST00000617641 CCDC121Q6ZUS5 278 aa17.68■□□□□ 0.42
PCDHGC3-205ENST00000617641 SPATA21Q7Z572 469 aa17.68■□□□□ 0.42
PCDHGC3-205ENST00000617641 KLHDC8BQ8IXV7 354 aa17.68■□□□□ 0.42
PCDHGC3-205ENST00000617641 CERS2Q96G23 380 aa17.68■□□□□ 0.42
PCDHGC3-205ENST00000617641 ZNF333Q96JL9 665 aa17.68■□□□□ 0.42
PCDHGC3-205ENST00000617641 FCRL5Q96RD9 977 aa17.68■□□□□ 0.42
PCDHGC3-205ENST00000617641 ALG13Q9NP73 1137 aaKnown RBP17.68■□□□□ 0.42
PCDHGC3-205ENST00000617641 NPY2RP49146 381 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 NDST2P52849 883 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 RING1Q06587 406 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 LRRC26Q2I0M4 334 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 NADSYN1Q6IA69 706 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 CHSY1Q86X52 802 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 ZNF276Q8N554 614 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 IPMKQ8NFU5 416 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 ZNF75CPQ92670 426 aaPredicted RBP17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 ZNF512Q96ME7 567 aaPredicted RBP17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 RPRD1AQ96P16 312 aaPredicted RBP17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 SRPK1Q96SB4 655 aaKnown RBP17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 FNIP2Q9P278 1114 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 AFF4Q9UHB7 1163 aaKnown RBP17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 AAR2Q9Y312 384 aaKnown RBP17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 J3KR12 359 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 PSMD3O43242 534 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 SOD2P04179 222 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 ALADP13716 330 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 CCNFP41002 786 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 ETV4P43268 484 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 CDH17Q12864 832 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 ANKRD20A4Q4UJ75 823 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 TMEM135Q86UB9 458 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 LRRC49Q8IUZ0 686 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 ZNF689Q96CS4 500 aaPredicted RBP17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 MFSD3Q96ES6 412 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 ZNF558Q96NG5 402 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 TBL1YQ9BQ87 522 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 SLC13A1Q9BZW2 595 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 PCMTD2Q9NV79 361 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 ZFATQ9P243 1243 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 LTBP2Q14767 1821 aa17.67■□□□□ 0.42
PCDHGC3-205ENST00000617641 ZCWPW2A0A1B0GU75 182 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 VGLL3A8MV65 326 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 ANXA9O76027 345 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 NEBLO76041 1014 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 PEX11BO96011 259 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 SPRED3Q2MJR0 410 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 SLC39A11Q8N1S5 342 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 TMEM169Q96HH4 297 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 FICDQ9BVA6 458 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 IL22Q9GZX6 179 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 CHRAC1Q9NRG0 131 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 WBP1LQ9NX94 342 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 ZNF212Q9UDV6 495 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 PHTF1Q9UMS5 762 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 ABHD14A-ACY1A0A1B0GW23 586 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 DRGXA6NNA5 263 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 USP1O94782 785 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 GJB5O95377 273 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 DHRS4L1P0CG22 281 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 CSF2RAP15509 400 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 RFC2P35250 354 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 ANO4Q32M45 955 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 LINC00523Q86TU6 105 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 ZNF461Q8TAF7 563 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 CCT6BQ92526 530 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 PAWRQ96IZ0 340 aaKnown RBP17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 IQCGQ9H095 443 aaKnown RBP17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 CYP4F11Q9HBI6 524 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 DNMT3LQ9UJW3 386 aa17.66■□□□□ 0.42
PCDHGC3-205ENST00000617641 FAM237BA0A1B0GVD1 139 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 CCDC78A2IDD5 438 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 CCT8L1PA6NM43 557 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 PMPCBO75439 489 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 ABLIM3O94929 683 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 HMGA1P17096 107 aaKnown RBP17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 CNTFP26441 200 aa17.65■□□□□ 0.42
PCDHGC3-205ENST00000617641 ATP5C1P36542 298 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms