RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, human

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FMR1-216	ENST00000616614	CAMK2G	Q13555	558 aa	Predicted RBP	32.58	■■■□□ 2.81
FMR1-216	ENST00000616614	DPYSL3	Q14195	570 aa		32.58	■■■□□ 2.81
FMR1-216	ENST00000616614	KRT81	Q14533	505 aa		32.58	■■■□□ 2.81
FMR1-216	ENST00000616614	IL31	Q6EBC2	164 aa		32.58	■■■□□ 2.81
FMR1-216	ENST00000616614	WDR5B	Q86VZ2	330 aa		32.58	■■■□□ 2.81
FMR1-216	ENST00000616614	NPW	Q8N729	165 aa		32.58	■■■□□ 2.81
FMR1-216	ENST00000616614	FRS2	Q8WU20	508 aa		32.58	■■■□□ 2.81
FMR1-216	ENST00000616614	RAPGEF5	Q92565	580 aa		32.58	■■■□□ 2.81
FMR1-216	ENST00000616614	CELF6	Q96J87	481 aa	Known RBP	32.58	■■■□□ 2.81
FMR1-216	ENST00000616614	TPSD1	Q9BZJ3	242 aa		32.58	■■■□□ 2.81
FMR1-216	ENST00000616614	MKRN2	Q9H000	416 aa	Known RBP	32.58	■■■□□ 2.81
FMR1-216	ENST00000616614	SYNCRIP	O60506	623 aa	Known RBP	32.57	■■■□□ 2.8
FMR1-216	ENST00000616614	VAV1	P15498	845 aa		32.57	■■■□□ 2.8
FMR1-216	ENST00000616614	NDUFV2	P19404	249 aa		32.57	■■■□□ 2.8
FMR1-216	ENST00000616614	ARL4A	P40617	200 aa		32.57	■■■□□ 2.8
FMR1-216	ENST00000616614	VASP	P50552	380 aa	Predicted RBP	32.57	■■■□□ 2.8
FMR1-216	ENST00000616614	SRSF5	Q13243	272 aa	Known RBP	32.57	■■■□□ 2.8
FMR1-216	ENST00000616614	STARD3	Q14849	445 aa		32.57	■■■□□ 2.8
FMR1-216	ENST00000616614	HNRNPA1L2	Q32P51	320 aa	Known RBP	32.57	■■■□□ 2.8
FMR1-216	ENST00000616614	SH2D3C	Q8N5H7	860 aa		32.57	■■■□□ 2.8
FMR1-216	ENST00000616614	HMCES	Q96FZ2	354 aa		32.57	■■■□□ 2.8
FMR1-216	ENST00000616614	LRRC19	Q9H756	370 aa		32.57	■■■□□ 2.8
FMR1-216	ENST00000616614	HS3ST2	Q9Y278	367 aa		32.57	■■■□□ 2.8
FMR1-216	ENST00000616614	CCDC163	A0A0D9SF12	145 aa		32.56	■■■□□ 2.8
FMR1-216	ENST00000616614	RASA4B	C9J798	803 aa		32.56	■■■□□ 2.8
FMR1-216	ENST00000616614	DCLK1	O15075	740 aa		32.56	■■■□□ 2.8
FMR1-216	ENST00000616614	AXIN1	O15169	862 aa		32.56	■■■□□ 2.8
FMR1-216	ENST00000616614	RASA4	O43374	803 aa		32.56	■■■□□ 2.8
FMR1-216	ENST00000616614	LILRB5	O75023	590 aa		32.56	■■■□□ 2.8
FMR1-216	ENST00000616614	CD160	O95971	181 aa		32.56	■■■□□ 2.8
FMR1-216	ENST00000616614	SRC	P12931	536 aa		32.56	■■■□□ 2.8
FMR1-216	ENST00000616614	C9orf64	Q5T6V5	341 aa		32.56	■■■□□ 2.8
FMR1-216	ENST00000616614	AFMID	Q63HM1	303 aa		32.56	■■■□□ 2.8
FMR1-216	ENST00000616614	ARHGAP12	Q8IWW6	846 aa		32.56	■■■□□ 2.8
FMR1-216	ENST00000616614	TP53INP2	Q8IXH6	220 aa		32.56	■■■□□ 2.8
FMR1-216	ENST00000616614	KCTD6	Q8NC69	237 aa		32.56	■■■□□ 2.8
FMR1-216	ENST00000616614	PTPRN2	Q92932	1015 aa		32.56	■■■□□ 2.8
FMR1-216	ENST00000616614	MRGPRX1	Q96LB2	322 aa		32.56	■■■□□ 2.8
FMR1-216	ENST00000616614	SLC39A8	Q9C0K1	460 aa		32.56	■■■□□ 2.8
FMR1-216	ENST00000616614	SLC25A13	Q9UJS0	675 aa		32.56	■■■□□ 2.8
FMR1-216	ENST00000616614	ARIH1	Q9Y4X5	557 aa	Predicted RBP	32.56	■■■□□ 2.8
FMR1-216	ENST00000616614	PCDHGA2	Q9Y5H1	932 aa		32.56	■■■□□ 2.8
FMR1-216	ENST00000616614	CACNA1H	O95180	2353 aa		32.55	■■■□□ 2.8
FMR1-216	ENST00000616614	SMAD6	O43541	496 aa	Known RBP	32.55	■■■□□ 2.8
FMR1-216	ENST00000616614	HR	O43593	1189 aa		32.55	■■■□□ 2.8
FMR1-216	ENST00000616614	ATP9B	O43861	1147 aa		32.55	■■■□□ 2.8
FMR1-216	ENST00000616614	SIN3B	O75182	1162 aa		32.55	■■■□□ 2.8
FMR1-216	ENST00000616614	ALDH1A2	O94788	518 aa		32.55	■■■□□ 2.8
FMR1-216	ENST00000616614	TNNT1	P13805	278 aa		32.55	■■■□□ 2.8
FMR1-216	ENST00000616614	YBEY	P58557	167 aa	Predicted RBP	32.55	■■■□□ 2.8
FMR1-216	ENST00000616614	LRRC38	Q5VT99	294 aa		32.55	■■■□□ 2.8
FMR1-216	ENST00000616614	C11orf63	Q6NUN7	778 aa		32.55	■■■□□ 2.8
FMR1-216	ENST00000616614	PDLIM2	Q96JY6	352 aa		32.55	■■■□□ 2.8
FMR1-216	ENST00000616614	IRF2BPL	Q9H1B7	796 aa		32.55	■■■□□ 2.8
FMR1-216	ENST00000616614	SUN2	Q9UH99	717 aa		32.55	■■■□□ 2.8
FMR1-216	ENST00000616614	DMD	P11532	3685 aa		32.55	■■■□□ 2.8
FMR1-216	ENST00000616614	MYO15A	Q9UKN7	3530 aa		32.55	■■■□□ 2.8
FMR1-216	ENST00000616614	KDELR3	O43731	214 aa		32.54	■■■□□ 2.8
FMR1-216	ENST00000616614	SPOP	O43791	374 aa		32.54	■■■□□ 2.8
FMR1-216	ENST00000616614	ETFB	P38117	255 aa		32.54	■■■□□ 2.8
FMR1-216	ENST00000616614	NHLH1	Q02575	133 aa		32.54	■■■□□ 2.8
FMR1-216	ENST00000616614	LEKR1	Q6ZMV7	388 aa		32.54	■■■□□ 2.8
FMR1-216	ENST00000616614	PHOX2B	Q99453	314 aa		32.54	■■■□□ 2.8
FMR1-216	ENST00000616614	CALN1	Q9BXU9	219 aa		32.54	■■■□□ 2.8
FMR1-216	ENST00000616614	RCOR3	Q9P2K3	495 aa	Predicted RBP	32.54	■■■□□ 2.8
FMR1-216	ENST00000616614	C3orf70	A6NLC5	250 aa	Predicted RBP	32.53	■■■□□ 2.8
FMR1-216	ENST00000616614	KDELR1	P24390	212 aa		32.53	■■■□□ 2.8
FMR1-216	ENST00000616614	NDST2	P52849	883 aa		32.53	■■■□□ 2.8
FMR1-216	ENST00000616614	KIF5A	Q12840	1032 aa		32.53	■■■□□ 2.8
FMR1-216	ENST00000616614	PDK2	Q15119	407 aa		32.53	■■■□□ 2.8
FMR1-216	ENST00000616614	DLG2	Q15700	870 aa		32.53	■■■□□ 2.8
FMR1-216	ENST00000616614	PARP15	Q460N3	678 aa		32.53	■■■□□ 2.8
FMR1-216	ENST00000616614	RHOT1	Q8IXI2	618 aa		32.53	■■■□□ 2.8
FMR1-216	ENST00000616614	PGBD3	Q8N328	593 aa		32.53	■■■□□ 2.8
FMR1-216	ENST00000616614	ATP11C	Q8NB49	1132 aa		32.53	■■■□□ 2.8
FMR1-216	ENST00000616614	PCDH19	Q8TAB3	1148 aa		32.53	■■■□□ 2.8
FMR1-216	ENST00000616614	BCCIP	Q9P287	314 aa	Known RBP eCLIP	32.53	■■■□□ 2.8
FMR1-216	ENST00000616614	NNMT	P40261	264 aa		32.52	■■■□□ 2.8
FMR1-216	ENST00000616614	NAP1L1	P55209	391 aa	Known RBP	32.52	■■■□□ 2.8
FMR1-216	ENST00000616614	SERINC3	Q13530	473 aa		32.52	■■■□□ 2.8
FMR1-216	ENST00000616614	DAAM2	Q86T65	1068 aa		32.52	■■■□□ 2.8
FMR1-216	ENST00000616614	TMPRSS6	Q8IU80	811 aa		32.52	■■■□□ 2.8
FMR1-216	ENST00000616614	OR2T3	Q8NH03	318 aa		32.52	■■■□□ 2.8
FMR1-216	ENST00000616614	CD93	Q9NPY3	652 aa		32.52	■■■□□ 2.8
FMR1-216	ENST00000616614	INVS	Q9Y283	1065 aa		32.52	■■■□□ 2.8
FMR1-216	ENST00000616614	VPS13A	Q96RL7	3174 aa		32.52	■■■□□ 2.8
FMR1-216	ENST00000616614	MACROD2	A1Z1Q3	448 aa		32.51	■■■□□ 2.8
FMR1-216	ENST00000616614	GRID2IP	A4D2P6	1211 aa		32.51	■■■□□ 2.8
FMR1-216	ENST00000616614	ZNF821	O75541	412 aa	Predicted RBP	32.51	■■■□□ 2.8
FMR1-216	ENST00000616614	ACCSL	Q4AC99	568 aa		32.51	■■■□□ 2.8
FMR1-216	ENST00000616614	RETSAT	Q6NUM9	610 aa		32.51	■■■□□ 2.8
FMR1-216	ENST00000616614	FRMD1	Q8N878	549 aa		32.51	■■■□□ 2.8
FMR1-216	ENST00000616614	LRRC57	Q8N9N7	239 aa		32.51	■■■□□ 2.8
FMR1-216	ENST00000616614	FAF2	Q96CS3	445 aa		32.51	■■■□□ 2.8
FMR1-216	ENST00000616614	FAM129B	Q96TA1	746 aa		32.51	■■■□□ 2.8
FMR1-216	ENST00000616614	ZNF670	Q9BS34	389 aa		32.51	■■■□□ 2.8
FMR1-216	ENST00000616614	DONSON	Q9NYP3	566 aa		32.51	■■■□□ 2.8
FMR1-216	ENST00000616614	USP34	Q70CQ2	3546 aa		32.51	■■■□□ 2.8
FMR1-216	ENST00000616614	EDDM13	A0A1B0GTR0	161 aa		32.51	■■■□□ 2.79
FMR1-216	ENST00000616614	NBL1	P41271	181 aa		32.51	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms