RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 FIBCD1Q8N539 461 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 PQLC3Q8N755 202 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 PCDH19Q8TAB3 1148 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 EXT2Q93063 718 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 CCDC138Q96M89 665 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 PPP1R10Q96QC0 940 aaKnown RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 CNPY3Q9BT09 278 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 HAPLN2Q9GZV7 340 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 SNX25Q9H3E2 840 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 STN1Q9H668 368 aaKnown RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 SYBUQ9NX95 663 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 KLHL8Q9P2G9 620 aaPredicted RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 RUVBL2Q9Y230 463 aaKnown RBP6.8□□□□□ -1.32
LMO3-235ENST00000616247 PCDHB12Q9Y5F1 795 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 ST14Q9Y5Y6 855 aa6.8□□□□□ -1.32
LMO3-235ENST00000616247 NFASCO94856 1347 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 NAV1Q8NEY1 1877 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 H0YCG3 227 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 TRIM38O00635 465 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 PAPSS1O43252 624 aaPredicted RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 NDUFB5O43674 189 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 ADAM23O75077 832 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 SERPINB7O75635 380 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 MICAL2O94851 1124 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 S100BP04271 92 aaPredicted RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 JUNP05412 331 aaKnown RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 C2P06681 752 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 POLBP06746 335 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 CD247P20963 164 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 L1CAMP32004 1257 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 SPRP35270 261 aaPredicted RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 APOFQ13790 326 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 PIGGQ5H8A4 983 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 MAGEE2Q8TD90 523 aaPredicted RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 CANT1Q8WVQ1 401 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 DLG3Q92796 817 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 FBXL20Q96IG2 436 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 ANKRD36BP1Q96IX9 119 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 ZDHHC15Q96MV8 337 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 SNRNP25Q9BV90 132 aaKnown RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 FRMD8Q9BZ67 464 aaPredicted RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 ZNF518BQ9C0D4 1074 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 DRC3Q9H069 523 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 CCDC68Q9H2F9 335 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 ZFYVE28Q9HCC9 887 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 IARS2Q9NSE4 1012 aaKnown RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 TBCCD1Q9NVR7 557 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 IGSF9Q9P2J2 1179 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 HMGXB4Q9UGU5 601 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 ZNF229Q9UJW7 825 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 SLC8A2Q9UPR5 921 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 EFR3BQ9Y2G0 817 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 TMX2Q9Y320 296 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 MFHAS1Q9Y4C4 1052 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 MRPL42Q9Y6G3 142 aaKnown RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 RGL2O15211 777 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 HTRA2O43464 458 aaPredicted RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 OXSR1O95747 527 aaPredicted RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 HSPA8P11142 646 aaKnown RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 MAGP20916 626 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 BMXP51813 675 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 LSM3P62310 102 aaKnown RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 GSTM4Q03013 218 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 PGM5Q15124 567 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 RPS6KA2Q15349 733 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 PGS1Q32NB8 556 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 B3GNT9Q6UX72 402 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 DCDC5Q6ZRR9 648 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 C15orf52Q6ZUT6 534 aaKnown RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 RPS27LQ71UM5 84 aaKnown RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 FAM160B2Q86V87 743 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 ZC3H7AQ8IWR0 971 aaKnown RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 LRRC71Q8N4P6 559 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 C12orf29Q8N999 325 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 OR52K1Q8NGK4 314 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 TAMM41Q96BW9 452 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 RPL10LQ96L21 214 aaKnown RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 ZMAT2Q96NC0 199 aaKnown RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 PDCD2LQ9BRP1 358 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 BEGAINQ9BUH8 593 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 DGCR6LQ9BY27 220 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 ACE2Q9BYF1 805 aaPredicted RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 TRIM8Q9BZR9 551 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 PLAC1Q9HBJ0 212 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 PTPRHQ9HD43 1115 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 PNPLA8Q9NP80 782 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 OLAHQ9NV23 265 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 ZDHHC2Q9UIJ5 367 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 GPC6Q9Y625 555 aaPredicted RBP6.79□□□□□ -1.32
LMO3-235ENST00000616247 CNTNAP4Q9C0A0 1308 aa6.79□□□□□ -1.32
LMO3-235ENST00000616247 BCAS2O75934 225 aaPredicted RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 NR3C2P08235 984 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 ZNF26P17031 533 aaPredicted RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 TGM2P21980 687 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 CNTFP26441 200 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 PSMB4P28070 264 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 PTPN7P35236 360 aa6.78□□□□□ -1.32
LMO3-235ENST00000616247 IREB2P48200 963 aaKnown RBP6.78□□□□□ -1.32
LMO3-235ENST00000616247 SLC7A2P52569 658 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms