RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 DNAJC28Q9NX36 388 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 CITO14578 2027 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 PSMD12O00232 456 aaPredicted RBP13.41□□□□□ -0.26
MSH6-214ENST00000616033 HCRTO43612 131 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 TRIM13O60858 407 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 EGFRP00533 1210 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 IL1BP01584 269 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 PRKCBP05771 671 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 OCM2P0CE71 109 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 OCMP0CE72 109 aaPredicted RBP13.41□□□□□ -0.26
MSH6-214ENST00000616033 PTGER2P43116 358 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 ZNF423Q2M1K9 1284 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 HERC6Q8IVU3 1022 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 SLC4A11Q8NBS3 891 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 DCPSQ96C86 337 aaKnown RBP13.41□□□□□ -0.26
MSH6-214ENST00000616033 TSNARE1Q96NA8 513 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 TRPC7Q9HCX4 862 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 IARS2Q9NSE4 1012 aaKnown RBP13.41□□□□□ -0.26
MSH6-214ENST00000616033 TMEM98Q9Y2Y6 226 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 FOCADQ5VW36 1801 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 NEMP2A6NFY4 417 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 ZNF195O14628 629 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 RGS20O76081 388 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 OXSR1O95747 527 aaPredicted RBP13.41□□□□□ -0.26
MSH6-214ENST00000616033 GARSP41250 739 aaKnown RBP13.41□□□□□ -0.26
MSH6-214ENST00000616033 NDST1P52848 882 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 PLCL1Q15111 1095 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 CCDC14Q49A88 953 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 MAP1SQ66K74 1059 aaPredicted RBP13.41□□□□□ -0.26
MSH6-214ENST00000616033 FSTL4Q6MZW2 842 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 EPGNQ6UW88 154 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 SMYD1Q8NB12 490 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 C12orf43Q96C57 262 aaKnown RBP13.41□□□□□ -0.26
MSH6-214ENST00000616033 EFCAB1Q9HAE3 211 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 NMRAL1Q9HBL8 299 aa13.41□□□□□ -0.26
MSH6-214ENST00000616033 C1orf232A0A0U1RR37 186 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 H0YCG3 227 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 ZBTB11O95625 1053 aaPredicted RBP13.4□□□□□ -0.26
MSH6-214ENST00000616033 S100BP04271 92 aaPredicted RBP13.4□□□□□ -0.26
MSH6-214ENST00000616033 C2P06681 752 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 TSHRP16473 764 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 TFEBP19484 476 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 ADORA2BP29275 332 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 GRIA3P42263 894 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 GNA12Q03113 381 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 TRAF2Q12933 501 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 SEPT6Q14141 434 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 AGKQ53H12 422 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 WDR49Q8IV35 697 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 LPGAT1Q92604 370 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 EXT2Q93063 718 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 CAMKK2Q96RR4 588 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 PORCNQ9H237 461 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 PNPLA8Q9NP80 782 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 KLHL8Q9P2G9 620 aaPredicted RBP13.4□□□□□ -0.26
MSH6-214ENST00000616033 TLK1Q9UKI8 766 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 E7ENX8 843 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 ASNSP08243 561 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 KCNA2P16389 499 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 GOLGA7BQ2TAP0 167 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 STYK1Q6J9G0 422 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 VSIG10LQ86VR7 867 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 CDKL3Q8IVW4 592 aaPredicted RBP13.4□□□□□ -0.26
MSH6-214ENST00000616033 MCUQ8NE86 351 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 ADCY4Q8NFM4 1077 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 OR9I1Q8NGQ6 314 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 USP33Q8TEY7 942 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 KCTD4Q8WVF5 259 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 TMEM176AQ96HP8 235 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 RUVBL2Q9Y230 463 aaKnown RBP13.4□□□□□ -0.26
MSH6-214ENST00000616033 CDYLQ9Y232 598 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 WDR37Q9Y2I8 494 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 SNX9Q9Y5X1 595 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 TLL2Q9Y6L7 1015 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 BRWD3Q6RI45 1802 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 DOCK5Q9H7D0 1870 aa13.4□□□□□ -0.26
MSH6-214ENST00000616033 H6PDO95479 791 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 NAMPTP43490 491 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 PHEXP78562 749 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 CNTN2Q02246 1040 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 ITGADQ13349 1161 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 GEN1Q17RS7 908 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 PMF1Q6P1K2 205 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 TMEM26Q6ZUK4 368 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 PARP8Q8N3A8 854 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 SLC45A3Q96JT2 553 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 FCRL3Q96P31 734 aaPredicted RBP13.39□□□□□ -0.27
MSH6-214ENST00000616033 MPHOSPH6Q99547 160 aaKnown RBP13.39□□□□□ -0.27
MSH6-214ENST00000616033 MRPL4Q9BYD3 311 aaKnown RBP13.39□□□□□ -0.27
MSH6-214ENST00000616033 TBC1D23Q9NUY8 699 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 RNF103O00237 685 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 GPC4O75487 556 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 STBD1O95210 358 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 KCNH1O95259 989 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 PRKCGP05129 697 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 CASP2P42575 452 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 CLDN10P78369 228 aa13.39□□□□□ -0.27
MSH6-214ENST00000616033 IFRD2Q12894 506 aaPredicted RBP13.39□□□□□ -0.27
MSH6-214ENST00000616033 USP10Q14694 798 aaKnown RBP13.39□□□□□ -0.27
MSH6-214ENST00000616033 FGD3Q5JSP0 725 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms