RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 OLFM3Q96PB7 478 aa14.29□□□□□ -0.12
SSBP2-220ENST00000615665 CINPQ9BW66 212 aaPredicted RBP14.29□□□□□ -0.12
SSBP2-220ENST00000615665 MUC3BQ9H195 1237 aa14.29□□□□□ -0.12
SSBP2-220ENST00000615665 STN1Q9H668 368 aaKnown RBP14.29□□□□□ -0.12
SSBP2-220ENST00000615665 VTI1BQ9UEU0 232 aa14.29□□□□□ -0.12
SSBP2-220ENST00000615665 CXorf49A8MYA2 514 aaPredicted RBP14.28□□□□□ -0.12
SSBP2-220ENST00000615665 GSC2O15499 205 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 ZBTB24O43167 697 aaPredicted RBP14.28□□□□□ -0.12
SSBP2-220ENST00000615665 RAMP2O60895 175 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 SRP72O76094 671 aaKnown RBP14.28□□□□□ -0.12
SSBP2-220ENST00000615665 PYGLP06737 847 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 GRIA1P42261 906 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 NAGLUP54802 743 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 LAYNQ6UX15 382 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 TMEM130Q8N3G9 435 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 MPP5Q8N3R9 675 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 CATSPER2Q96P56 530 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 LRCH1Q9Y2L9 728 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 MAGEA13PA6NCF6 341 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 TYROBPO43914 113 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 SNAI1O95863 264 aaPredicted RBP14.28□□□□□ -0.12
SSBP2-220ENST00000615665 IQCF3P0C7M6 154 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 CLCNKBP51801 687 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 DAOAP59103 153 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 NEPROQ6NW34 567 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 IGDCC3Q8IVU1 814 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 UBR7Q8N806 425 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 KYQ8NBH2 561 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 PBXIP1Q96AQ6 731 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 PCED1BQ96HM7 432 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 FGD4Q96M96 766 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 ACE2Q9BYF1 805 aaPredicted RBP14.28□□□□□ -0.12
SSBP2-220ENST00000615665 ZNF212Q9UDV6 495 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 MYBPHLA2RUH7 354 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 DNAJC6O75061 913 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 AP2A1O95782 977 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 SLC11A2P49281 568 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 SLC25A3Q00325 362 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 TMEM259Q4ZIN3 620 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 IFNLR1Q8IU57 520 aaPredicted RBP14.28□□□□□ -0.12
SSBP2-220ENST00000615665 TRIML2Q8N7C3 387 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 ZMAT2Q96NC0 199 aaKnown RBP14.28□□□□□ -0.12
SSBP2-220ENST00000615665 ZBTB18Q99592 522 aa14.28□□□□□ -0.12
SSBP2-220ENST00000615665 EIF2B3Q9NR50 452 aaKnown RBP14.28□□□□□ -0.12
SSBP2-220ENST00000615665 DNAJC25-GNG10A0A024R161 153 aa14.27□□□□□ -0.12
SSBP2-220ENST00000615665 PRR5-ARHGAP8B1AHC4 643 aa14.27□□□□□ -0.12
SSBP2-220ENST00000615665 E7ESA3 106 aa14.27□□□□□ -0.12
SSBP2-220ENST00000615665 GSTA4O15217 222 aa14.27□□□□□ -0.12
SSBP2-220ENST00000615665 ARHGAP8P85298 464 aa14.27□□□□□ -0.12
SSBP2-220ENST00000615665 KRT72Q14CN4 511 aa14.27□□□□□ -0.12
SSBP2-220ENST00000615665 INSCQ1MX18 579 aa14.27□□□□□ -0.12
SSBP2-220ENST00000615665 MARK2Q7KZI7 788 aaKnown RBP14.27□□□□□ -0.12
SSBP2-220ENST00000615665 SLC41A1Q8IVJ1 513 aa14.27□□□□□ -0.12
SSBP2-220ENST00000615665 SLC9A7Q96T83 725 aa14.27□□□□□ -0.12
SSBP2-220ENST00000615665 CAB39LQ9H9S4 337 aa14.27□□□□□ -0.12
SSBP2-220ENST00000615665 TLR8Q9NR97 1041 aaKnown RBP14.27□□□□□ -0.12
SSBP2-220ENST00000615665 PNPOQ9NVS9 261 aa14.27□□□□□ -0.12
SSBP2-220ENST00000615665 KANSL3Q9P2N6 904 aa14.27□□□□□ -0.12
SSBP2-220ENST00000615665 YJEFN3A6XGL0 299 aa14.27□□□□□ -0.12
SSBP2-220ENST00000615665 IRF1P10914 325 aa14.27□□□□□ -0.12
SSBP2-220ENST00000615665 RPL14P50914 215 aaKnown RBP14.27□□□□□ -0.12
SSBP2-220ENST00000615665 TCHHL1Q5QJ38 904 aaPredicted RBP14.27□□□□□ -0.12
SSBP2-220ENST00000615665 UROC1Q96N76 676 aa14.27□□□□□ -0.12
SSBP2-220ENST00000615665 NDFIP2Q9NV92 336 aa14.27□□□□□ -0.12
SSBP2-220ENST00000615665 PPM1JQ5JR12 505 aa14.27□□□□□ -0.13
SSBP2-220ENST00000615665 DCLRE1AQ6PJP8 1040 aa14.27□□□□□ -0.13
SSBP2-220ENST00000615665 NET1Q7Z628 596 aaPredicted RBP14.27□□□□□ -0.13
SSBP2-220ENST00000615665 SNX32Q86XE0 403 aa14.27□□□□□ -0.13
SSBP2-220ENST00000615665 EME1Q96AY2 570 aa14.27□□□□□ -0.13
SSBP2-220ENST00000615665 EGFL8Q99944 293 aa14.27□□□□□ -0.13
SSBP2-220ENST00000615665 DTNAQ9Y4J8 743 aa14.27□□□□□ -0.13
SSBP2-220ENST00000615665 GLP2RO95838 553 aa14.27□□□□□ -0.13
SSBP2-220ENST00000615665 XPAP23025 273 aaPredicted RBP14.27□□□□□ -0.13
SSBP2-220ENST00000615665 YWHAQP27348 245 aa14.27□□□□□ -0.13
SSBP2-220ENST00000615665 RABGGTBP53611 331 aa14.27□□□□□ -0.13
SSBP2-220ENST00000615665 ESRRGP62508 458 aa14.27□□□□□ -0.13
SSBP2-220ENST00000615665 TWF1Q12792 350 aa14.27□□□□□ -0.13
SSBP2-220ENST00000615665 SPDYAQ5MJ70 313 aa14.27□□□□□ -0.13
SSBP2-220ENST00000615665 SYPL2Q5VXT5 272 aa14.27□□□□□ -0.13
SSBP2-220ENST00000615665 FAM136AQ96C01 138 aa14.27□□□□□ -0.13
SSBP2-220ENST00000615665 PHF21BQ96EK2 531 aa14.27□□□□□ -0.13
SSBP2-220ENST00000615665 MRPL46Q9H2W6 279 aaKnown RBP14.27□□□□□ -0.13
SSBP2-220ENST00000615665 SLC30A1Q9Y6M5 507 aa14.27□□□□□ -0.13
SSBP2-220ENST00000615665 CDK5RAP2Q96SN8 1893 aa14.26□□□□□ -0.13
SSBP2-220ENST00000615665 LRRC37AA6NMS7 1700 aa14.26□□□□□ -0.13
SSBP2-220ENST00000615665 RNF103-CHMP3A0A140T963 221 aa14.26□□□□□ -0.13
SSBP2-220ENST00000615665 PLIN3O60664 434 aa14.26□□□□□ -0.13
SSBP2-220ENST00000615665 C2P06681 752 aa14.26□□□□□ -0.13
SSBP2-220ENST00000615665 PTPN3P26045 913 aa14.26□□□□□ -0.13
SSBP2-220ENST00000615665 GRIK3Q13003 919 aa14.26□□□□□ -0.13
SSBP2-220ENST00000615665 CLEC20AQ6ZU45 233 aa14.26□□□□□ -0.13
SSBP2-220ENST00000615665 FCRL2Q96LA5 508 aaPredicted RBP14.26□□□□□ -0.13
SSBP2-220ENST00000615665 GCNAQ96QF7 691 aa14.26□□□□□ -0.13
SSBP2-220ENST00000615665 GBA3Q9H227 469 aa14.26□□□□□ -0.13
SSBP2-220ENST00000615665 PNPLA8Q9NP80 782 aa14.26□□□□□ -0.13
SSBP2-220ENST00000615665 GDAP2Q9NXN4 497 aa14.26□□□□□ -0.13
SSBP2-220ENST00000615665 COPG2Q9UBF2 871 aa14.26□□□□□ -0.13
SSBP2-220ENST00000615665 SLC45A1Q9Y2W3 748 aa14.26□□□□□ -0.13
SSBP2-220ENST00000615665 TMEM114B3SHH9 223 aa14.26□□□□□ -0.13
SSBP2-220ENST00000615665 UPP2O95045 317 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms