RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 FLT3P36888 993 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 CLCN5P51795 746 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 LYPLAL1Q5VWZ2 237 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 METTL3Q86U44 580 aaKnown RBP17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 PSTKQ8IV42 348 aaKnown RBP17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 REEP1Q9H902 201 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 ETNK2Q9NVF9 386 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 PCDHA11Q9Y5I1 949 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 SIGLEC16A6NMB1 481 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 UQCRBP14927 111 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 YBX3P16989 372 aaKnown RBP eCLIP17.68■□□□□ 0.425e-7■□□□□ 10.6
HMGXB3-206ENST00000613459 KDELR1P24390 212 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 NOS2P35228 1153 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 DRG2P55039 364 aaKnown RBP17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 SPIRE1Q08AE8 756 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 RGS21Q2M5E4 152 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 STK32CQ86UX6 486 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 SYTL1Q8IYJ3 562 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 DEFB106AQ8N104 65 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 CDRT15Q96T59 188 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 ADI1Q9BV57 179 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 CRNNQ9UBG3 495 aaPredicted RBP17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 DNPEPQ9ULA0 475 aa17.68■□□□□ 0.42
HMGXB3-206ENST00000613459 A0A0A0MRY4 1105 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 FAM237AA0A1B0GTK4 181 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 LTA4HP09960 611 aaKnown RBP17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 AMPD1P23109 780 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 SLC12A3P55017 1021 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 FKBP1CQ5VVH2 108 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 KCNT2Q6UVM3 1135 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 GPSM1Q86YR5 675 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 CREG2Q8IUH2 290 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 STAG3L4Q8TBR4 150 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 TRPC4APQ8TEL6 797 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 SPATA13Q96N96 652 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 RPS6KA6Q9UK32 745 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 BCLAF3A2AJT9 711 aaKnown RBP17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 AHCYL1O43865 530 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 VAPBO95292 243 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 MMP13P45452 471 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 BCL2L1Q07817 233 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 INSCQ1MX18 579 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 ARMC12Q5T9G4 340 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 PIF1Q9H611 641 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 CDHR5Q9HBB8 845 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 RPRD1BQ9NQG5 326 aaKnown RBP17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 XPNPEP3Q9NQH7 507 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 ATP6V1HQ9UI12 483 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 GSTK1Q9Y2Q3 226 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 CLUHO75153 1309 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 QSOX1O00391 747 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 FAM153BP0C7A2 387 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 ACADMP11310 421 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 WARSP23381 471 aaKnown RBP17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 CXCR2P25025 360 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 RFX3P48380 749 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 IL2P60568 153 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 CSNK2BP67870 215 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 SLC15A2Q16348 729 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 FAM153CQ494X1 144 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 CENPIQ92674 756 aaPredicted RBP17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 OSMRQ99650 979 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 CATSPERZQ9NTU4 200 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 SAE1Q9UBE0 346 aaPredicted RBP17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 ITSN1Q15811 1721 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 NOS3P29474 1203 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 SSTR1P30872 391 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 SHMT1P34896 483 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 NEK5Q6P3R8 708 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 TRMT11Q7Z4G4 463 aaKnown RBP17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 CCDC33Q8N5R6 958 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 MCRS1Q96EZ8 462 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 HGH1Q9BTY7 390 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 NFKBIZQ9BYH8 718 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 ADAMTS13Q76LX8 1427 aa17.67■□□□□ 0.42
HMGXB3-206ENST00000613459 IFI35P80217 286 aaPredicted RBP17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 SH3RF1Q7Z6J0 888 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 BBS4Q96RK4 519 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 YME1L1Q96TA2 773 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 SNX8Q9Y5X2 465 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 COMMD3-BMI1R4GMX3 469 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 MLYCDO95822 493 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 LTFP02788 710 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 SMIM11AP58511 58 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 BNIP2Q12982 314 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 PRAMEF18Q5VWM3 479 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 KRT77Q7Z794 578 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 BHLHE22Q8NFJ8 381 aaPredicted RBP17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 BSNDQ8WZ55 320 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 HSFY1Q96LI6 401 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 NEK6Q9HC98 313 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 TRPV2Q9Y5S1 764 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 DIP2CQ9Y2E4 1556 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 CBX6O95503 412 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 SGCGQ13326 291 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 MACC1Q6ZN28 852 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 SOCS4Q8WXH5 440 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 CELF6Q96J87 481 aaKnown RBP17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 CIPCQ9C0C6 399 aa17.66■□□□□ 0.42
HMGXB3-206ENST00000613459 GRIP2Q9C0E4 1043 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms