RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 TTC39BQ5VTQ0 682 aaPredicted RBP22.38■■□□□ 1.17
CBWD3-207ENST00000611426 CIR1Q86X95 450 aaPredicted RBP22.38■■□□□ 1.17
CBWD3-207ENST00000611426 KDF1Q8NAX2 398 aaPredicted RBP22.38■■□□□ 1.17
CBWD3-207ENST00000611426 GATA6Q92908 595 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 OMDQ99983 421 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 FNDC3AQ9Y2H6 1198 aaKnown RBP22.38■■□□□ 1.17
CBWD3-207ENST00000611426 MSRB2Q9Y3D2 182 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 A0A1W2PP55 124 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 RNASEH2AO75792 299 aaKnown RBP22.38■■□□□ 1.17
CBWD3-207ENST00000611426 IPO7O95373 1038 aaKnown RBP22.38■■□□□ 1.17
CBWD3-207ENST00000611426 ERBB2P04626 1255 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 PLEKP08567 350 aaPredicted RBP22.38■■□□□ 1.17
CBWD3-207ENST00000611426 PNMA6AP0CW24 399 aaPredicted RBP22.38■■□□□ 1.17
CBWD3-207ENST00000611426 PDGFRAP16234 1089 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 SLC8A1P32418 973 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 NUMBP49757 651 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 SLC6A3Q01959 620 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 KLHL30Q0D2K2 578 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 NME3Q13232 169 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 KIAA0895LQ68EN5 471 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 FBXL22Q6P050 247 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 OLFML1Q6UWY5 402 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 ACRBPQ8NEB7 543 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 C16orf45Q96MC5 204 aaPredicted RBP22.38■■□□□ 1.17
CBWD3-207ENST00000611426 PCOLCE2Q9UKZ9 415 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 ZMIZ1Q9ULJ6 1067 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 ANKRD6Q9Y2G4 727 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 SNX11Q9Y5W9 270 aa22.38■■□□□ 1.17
CBWD3-207ENST00000611426 CFAP47Q6ZTR5 3102 aa22.37■■□□□ 1.17
CBWD3-207ENST00000611426 A0A1B0GVM2 712 aa22.37■■□□□ 1.17
CBWD3-207ENST00000611426 TMEM8BA6NDV4 472 aa22.37■■□□□ 1.17
CBWD3-207ENST00000611426 TCAF2A6NFQ2 919 aa22.37■■□□□ 1.17
CBWD3-207ENST00000611426 GRIA4P48058 902 aa22.37■■□□□ 1.17
CBWD3-207ENST00000611426 STK19P49842 368 aaPredicted RBP22.37■■□□□ 1.17
CBWD3-207ENST00000611426 GALCP54803 685 aa22.37■■□□□ 1.17
CBWD3-207ENST00000611426 OXCT1P55809 520 aa22.37■■□□□ 1.17
CBWD3-207ENST00000611426 BPIFB4P59827 614 aa22.37■■□□□ 1.17
CBWD3-207ENST00000611426 ETF1P62495 437 aaKnown RBP22.37■■□□□ 1.17
CBWD3-207ENST00000611426 SULT2A1Q06520 285 aa22.37■■□□□ 1.17
CBWD3-207ENST00000611426 MTA1Q13330 715 aa22.37■■□□□ 1.17
CBWD3-207ENST00000611426 FAM71AQ8IYT1 594 aa22.37■■□□□ 1.17
CBWD3-207ENST00000611426 PTPRN2Q92932 1015 aa22.37■■□□□ 1.17
CBWD3-207ENST00000611426 RPRD1AQ96P16 312 aaPredicted RBP22.37■■□□□ 1.17
CBWD3-207ENST00000611426 FAM129BQ96TA1 746 aa22.37■■□□□ 1.17
CBWD3-207ENST00000611426 SYT11Q9BT88 431 aa22.37■■□□□ 1.17
CBWD3-207ENST00000611426 NEUROG2Q9H2A3 272 aa22.37■■□□□ 1.17
CBWD3-207ENST00000611426 PDCL3Q9H2J4 239 aa22.37■■□□□ 1.17
CBWD3-207ENST00000611426 HAUS4Q9H6D7 363 aa22.37■■□□□ 1.17
CBWD3-207ENST00000611426 SERGEFQ9UGK8 458 aa22.37■■□□□ 1.17
CBWD3-207ENST00000611426 NENFQ9UMX5 172 aa22.37■■□□□ 1.17
CBWD3-207ENST00000611426 CHD6Q8TD26 2715 aa22.36■■□□□ 1.17
CBWD3-207ENST00000611426 LRRC72A6NJI9 287 aa22.36■■□□□ 1.17
CBWD3-207ENST00000611426 CBFA2T3O75081 653 aa22.36■■□□□ 1.17
CBWD3-207ENST00000611426 IGHV4-34P06331 123 aa22.36■■□□□ 1.17
CBWD3-207ENST00000611426 FTH1P19P0C7X4 201 aa22.36■■□□□ 1.17
CBWD3-207ENST00000611426 TNNT1P13805 278 aa22.36■■□□□ 1.17
CBWD3-207ENST00000611426 MZF1P28698 734 aaPredicted RBP22.36■■□□□ 1.17
CBWD3-207ENST00000611426 NOS2P35228 1153 aa22.36■■□□□ 1.17
CBWD3-207ENST00000611426 ARHGAP25P42331 645 aa22.36■■□□□ 1.17
CBWD3-207ENST00000611426 PLK1P53350 603 aa22.36■■□□□ 1.17
CBWD3-207ENST00000611426 AUHQ13825 339 aaKnown RBP22.36■■□□□ 1.17
CBWD3-207ENST00000611426 SUZ12Q15022 739 aaKnown RBP22.36■■□□□ 1.17
CBWD3-207ENST00000611426 PTPN20Q4JDL3 420 aa22.36■■□□□ 1.17
CBWD3-207ENST00000611426 NCEH1Q6PIU2 408 aa22.36■■□□□ 1.17
CBWD3-207ENST00000611426 RAB44Q7Z6P3 723 aaPredicted RBP22.36■■□□□ 1.17
CBWD3-207ENST00000611426 ADAT2Q7Z6V5 191 aaKnown RBP22.36■■□□□ 1.17
CBWD3-207ENST00000611426 STK40Q8N2I9 435 aa22.36■■□□□ 1.17
CBWD3-207ENST00000611426 TXLNBQ8N3L3 684 aa22.36■■□□□ 1.17
CBWD3-207ENST00000611426 PNPLA1Q8N8W4 532 aa22.36■■□□□ 1.17
CBWD3-207ENST00000611426 IGSF8Q969P0 613 aa22.36■■□□□ 1.17
CBWD3-207ENST00000611426 VANGL2Q9ULK5 521 aa22.36■■□□□ 1.17
CBWD3-207ENST00000611426 FZD4Q9ULV1 537 aa22.36■■□□□ 1.17
CBWD3-207ENST00000611426 PCDHGB2Q9Y5G2 931 aa22.36■■□□□ 1.17
CBWD3-207ENST00000611426 SPEGQ15772 3267 aa22.35■■□□□ 1.17
CBWD3-207ENST00000611426 M0QYT0 321 aa22.35■■□□□ 1.17
CBWD3-207ENST00000611426 AKR1B10O60218 316 aa22.35■■□□□ 1.17
CBWD3-207ENST00000611426 DAB1O75553 588 aa22.35■■□□□ 1.17
CBWD3-207ENST00000611426 PSMD8P48556 350 aa22.35■■□□□ 1.17
CBWD3-207ENST00000611426 VAV2P52735 878 aa22.35■■□□□ 1.17
CBWD3-207ENST00000611426 SPA17Q15506 151 aa22.35■■□□□ 1.17
CBWD3-207ENST00000611426 SLC18A3Q16572 532 aa22.35■■□□□ 1.17
CBWD3-207ENST00000611426 TDRD12Q587J7 1177 aaKnown RBP22.35■■□□□ 1.17
CBWD3-207ENST00000611426 LAYNQ6UX15 382 aa22.35■■□□□ 1.17
CBWD3-207ENST00000611426 DBX2Q6ZNG2 339 aa22.35■■□□□ 1.17
CBWD3-207ENST00000611426 SLC26A9Q7LBE3 791 aa22.35■■□□□ 1.17
CBWD3-207ENST00000611426 ZDHHC17Q8IUH5 632 aa22.35■■□□□ 1.17
CBWD3-207ENST00000611426 RHBDD1Q8TEB9 315 aa22.35■■□□□ 1.17
CBWD3-207ENST00000611426 ORAI3Q9BRQ5 295 aa22.35■■□□□ 1.17
CBWD3-207ENST00000611426 DEF6Q9H4E7 631 aa22.35■■□□□ 1.17
CBWD3-207ENST00000611426 MYO1AQ9UBC5 1043 aa22.35■■□□□ 1.17
CBWD3-207ENST00000611426 ADAMTS1Q9UHI8 967 aa22.35■■□□□ 1.17
CBWD3-207ENST00000611426 APOBEC2Q9Y235 224 aaKnown RBP22.35■■□□□ 1.17
CBWD3-207ENST00000611426 HS3ST4Q9Y661 456 aa22.35■■□□□ 1.17
CBWD3-207ENST00000611426 CABIN1Q9Y6J0 2220 aa22.34■■□□□ 1.17
CBWD3-207ENST00000611426 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.34■■□□□ 1.17
CBWD3-207ENST00000611426 FAM221BA6H8Z2 402 aa22.34■■□□□ 1.17
CBWD3-207ENST00000611426 KCNK3O14649 394 aa22.34■■□□□ 1.17
CBWD3-207ENST00000611426 FLRT2O43155 660 aa22.34■■□□□ 1.17
CBWD3-207ENST00000611426 ADH1BP00325 375 aa22.34■■□□□ 1.17
CBWD3-207ENST00000611426 IL1BP01584 269 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms