RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 L1CAMP32004 1257 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 CD151P48509 253 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 CHN2P52757 468 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 FASTKQ14296 549 aaKnown RBP6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 ARL13AQ5H913 290 aaPredicted RBP6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 AGAP9Q5VTM2 703 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 FSTL4Q6MZW2 842 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 OTOP3Q7RTS5 596 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 MFN1Q8IWA4 741 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 PHTF2Q8N3S3 785 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 EFHBQ8N7U6 833 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 PCYOX1LQ8NBM8 494 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 NCLNQ969V3 563 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 SKA1Q96BD8 255 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 HSFY1Q96LI6 401 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 GATA5Q9BWX5 397 aaPredicted RBP6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 TRIM15Q9C019 465 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 CDH19Q9H159 772 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 POMKQ9H5K3 350 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 USP29Q9HBJ7 922 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 GBA2Q9HCG7 927 aaPredicted RBP6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 NSMCE4AQ9NXX6 385 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 GPRC5DQ9NZD1 345 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 POMPQ9Y244 141 aa6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 PRG3Q9Y2Y8 225 aaPredicted RBP6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 AAR2Q9Y312 384 aaKnown RBP6.99□□□□□ -1.29
SYNPO2-206ENST00000610556 C10orf71Q711Q0 1435 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 RGSL1A5PLK6 1076 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 ERI2A8K979 691 aaKnown RBP6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 F8W8V4 182 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 TP73O15350 636 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 E2F6O75461 281 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 GCATO75600 419 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 LTFP02788 710 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 FAM58BPP0C7Q3 252 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 TPSB2P20231 275 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 IRF9Q00978 393 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 ENPEPQ07075 957 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 ZNF460Q14592 562 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 TPSAB1Q15661 275 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 TEDDM1Q5T9Z0 273 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 LRRC8BQ6P9F7 803 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 TTC33Q6PID6 262 aaPredicted RBP6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 ZBTB46Q86UZ6 589 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 UNC93AQ86WB7 457 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 SPATA22Q8NHS9 363 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 B4GALNT2Q8NHY0 566 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 SIGLEC10Q96LC7 697 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 SENP8Q96LD8 212 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 ZFP42Q96MM3 310 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 DCUN1D5Q9BTE7 237 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 FAM192AQ9GZU8 254 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 UTP6Q9NYH9 597 aaKnown RBP6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 PPME1Q9Y570 386 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 MDM4O15151 490 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 PFDN6O15212 129 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 PSMD3O43242 534 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 TSPAN1O60635 241 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 F9P00740 461 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 CDH13P55290 713 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 TSTA3Q13630 321 aaPredicted RBP6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 GPR162Q16538 588 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 RBBP7Q16576 425 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 GSTA3Q16772 222 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 GNASQ5JWF2 1037 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 C9orf57Q5W0N0 161 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 TAS2R42Q7RTR8 314 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 CTU1Q7Z7A3 348 aaKnown RBP6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 PQLC1Q8N2U9 271 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 FBXW8Q8N3Y1 598 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 QKIQ96PU8 341 aaKnown RBP eCLIP6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 NR1H4Q96RI1 486 aaPredicted RBP6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 SIKE1Q9BRV8 207 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 SLC4A5Q9BY07 1137 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 ADNPQ9H2P0 1102 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 CATSPERBQ9H7T0 1116 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 E5RI56 91 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 E7ESA3 106 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 AP3B1O00203 1094 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 MRASO14807 208 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 STBD1O95210 358 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 MYCP01106 439 aaPredicted RBP6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 S100BP04271 92 aaPredicted RBP6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 THP07101 528 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 MYL4P12829 197 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 UQCRBP14927 111 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 TFEBP19484 476 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 CCR1P32246 355 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 ADRA1BP35368 520 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 PSEN1P49768 467 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 TUBP50607 506 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 MAPK10P53779 464 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 GEMP55040 296 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 CLDN10P78369 228 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 MRPS5P82675 430 aaKnown RBP6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 BEX3Q00994 111 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 INPP5AQ14642 412 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 LBRQ14739 615 aaKnown RBP6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 GRM3Q14832 879 aa6.98□□□□□ -1.29
SYNPO2-206ENST00000610556 SLC25A52Q3SY17 297 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms