RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 ELF3P78545 371 aaPredicted RBP12.19□□□□□ -0.46
USP6NL-206ENST00000609853 TMPRSS15P98073 1019 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 GPR17Q13304 367 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 FAM171A1Q5VUB5 890 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 PDPK2PQ6A1A2 396 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 LCA5Q86VQ0 697 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 UMODL1-AS1Q8N2C9 162 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 CNTD1Q8N815 330 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 ATP6V0D2Q8N8Y2 350 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 MAGEC3Q8TD91 643 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 TMEM237Q96Q45 408 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 RBBP8Q99708 897 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 KIFC1Q9BW19 673 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 GLOD4Q9HC38 313 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 ENTPD7Q9NQZ7 604 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 CREBZFQ9NS37 354 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 KCNK4Q9NYG8 393 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 DNAJB4Q9UDY4 337 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 HS3ST4Q9Y661 456 aa12.19□□□□□ -0.46
USP6NL-206ENST00000609853 TPP1O14773 563 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 PARNO95453 639 aaKnown RBP12.18□□□□□ -0.46
USP6NL-206ENST00000609853 MPOP05164 745 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 DLDP09622 509 aaKnown RBP12.18□□□□□ -0.46
USP6NL-206ENST00000609853 ERVK-10P10266 1014 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 TYK2P29597 1187 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 MAP2K2P36507 400 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 MAGEA12P43365 314 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 POLD2P49005 469 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 SERPINB8P50452 374 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 LIMK2P53671 638 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 TRIP4Q15650 581 aaPredicted RBP12.18□□□□□ -0.46
USP6NL-206ENST00000609853 SNCBQ16143 134 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 CCDC153Q494R4 210 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 PCID2Q5JVF3 399 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 UNC5BQ8IZJ1 945 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 ANKLE1Q8NAG6 615 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 FCRL3Q96P31 734 aaPredicted RBP12.18□□□□□ -0.46
USP6NL-206ENST00000609853 CASD1Q96PB1 797 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 TBL1YQ9BQ87 522 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 SLC39A8Q9C0K1 460 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 LRMDAQ9H2I8 198 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 RETREG1Q9H6L5 497 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 MRM3Q9HC36 420 aaKnown RBP12.18□□□□□ -0.46
USP6NL-206ENST00000609853 ALG13Q9NP73 1137 aaKnown RBP12.18□□□□□ -0.46
USP6NL-206ENST00000609853 TLR8Q9NR97 1041 aaKnown RBP12.18□□□□□ -0.46
USP6NL-206ENST00000609853 THAP1Q9NVV9 213 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 PIH1D1Q9NWS0 290 aaKnown RBP12.18□□□□□ -0.46
USP6NL-206ENST00000609853 ZFP69BQ9UJL9 534 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 LRFN2Q9ULH4 789 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 GREB1Q4ZG55 1949 aa12.18□□□□□ -0.46
USP6NL-206ENST00000609853 IGLV3-10A0A075B6K4 115 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 TRAFD1O14545 582 aaPredicted RBP12.17□□□□□ -0.46
USP6NL-206ENST00000609853 MSI1O43347 362 aaKnown RBP12.17□□□□□ -0.46
USP6NL-206ENST00000609853 USP12O75317 370 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 SNNO75324 88 aaPredicted RBP12.17□□□□□ -0.46
USP6NL-206ENST00000609853 GRK2P25098 689 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 DNAJB1P25685 340 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 GRK4P32298 578 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 RENBPP51606 427 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 RPL10AP62906 217 aaKnown RBP12.17□□□□□ -0.46
USP6NL-206ENST00000609853 OCRLQ01968 901 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 RING1Q06587 406 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 BST1Q10588 318 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 HNRNPDQ14103 355 aaKnown RBP12.17□□□□□ -0.46
USP6NL-206ENST00000609853 PDE1CQ14123 709 aaPredicted RBP12.17□□□□□ -0.46
USP6NL-206ENST00000609853 CHI3L2Q15782 390 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 DDR2Q16832 855 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 UGP2Q16851 508 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 ARTNQ5T4W7 220 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 TEDDM1Q5T9Z0 273 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 FAM91A1Q658Y4 838 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 STRA8Q7Z7C7 330 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 TBC1D1Q86TI0 1168 aaPredicted RBP12.17□□□□□ -0.46
USP6NL-206ENST00000609853 KCNMB4Q86W47 210 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 CRLF3Q8IUI8 442 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 BTN2A3PQ96KV6 586 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 CDK5RAP1Q96SZ6 601 aaKnown RBP12.17□□□□□ -0.46
USP6NL-206ENST00000609853 ZYG11BQ9C0D3 744 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 FAM96AQ9H5X1 160 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 TMEM248Q9NWD8 314 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 OSER1Q9NX31 292 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 A0A0G2JND7 137 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 PLIN3O60664 434 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 NBNO60934 754 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 NEBLO76041 1014 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 PGFP49763 221 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 TNK2Q07912 1038 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 OVGP1Q12889 678 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 STX3Q13277 289 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 MPP3Q13368 585 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 KRT72Q14CN4 511 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 CERCAMQ5T4B2 595 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 PKN3Q6P5Z2 889 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 ANKS3Q6ZW76 656 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 CLNKQ7Z7G1 428 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 NPAS4Q8IUM7 802 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 FAM126BQ8IXS8 530 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 DBF4BQ8NFT6 615 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 RFWD2Q8NHY2 731 aa12.17□□□□□ -0.46
USP6NL-206ENST00000609853 SREK1Q8WXA9 508 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms