RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 WDR72Q3MJ13 1102 aa3.45□□□□□ -1.86
NEB-218ENST00000603639 MTERF2Q49AM1 385 aa3.45□□□□□ -1.86
NEB-218ENST00000603639 PGBD2Q6P3X8 592 aa3.45□□□□□ -1.86
NEB-218ENST00000603639 IRF2BP2Q7Z5L9 587 aa3.45□□□□□ -1.86
NEB-218ENST00000603639 RDM1Q8NG50 284 aa3.45□□□□□ -1.86
NEB-218ENST00000603639 NSUN6Q8TEA1 469 aaKnown RBP3.45□□□□□ -1.86
NEB-218ENST00000603639 TFB1MQ8WVM0 346 aaKnown RBP3.45□□□□□ -1.86
NEB-218ENST00000603639 DNAJB3Q8WWF6 145 aa3.45□□□□□ -1.86
NEB-218ENST00000603639 ASIC4Q96FT7 647 aa3.45□□□□□ -1.86
NEB-218ENST00000603639 IRX2Q9BZI1 471 aaPredicted RBP3.45□□□□□ -1.86
NEB-218ENST00000603639 COQ10BQ9H8M1 238 aa3.45□□□□□ -1.86
NEB-218ENST00000603639 MAD2L2Q9UI95 211 aa3.45□□□□□ -1.86
NEB-218ENST00000603639 DNAJB6O75190 326 aa3.45□□□□□ -1.86
NEB-218ENST00000603639 NR2F2P24468 414 aa3.45□□□□□ -1.86
NEB-218ENST00000603639 PRSS55Q6UWB4 352 aaPredicted RBP3.45□□□□□ -1.86
NEB-218ENST00000603639 LACC1Q8IV20 430 aa3.45□□□□□ -1.86
NEB-218ENST00000603639 CLPTM1LQ96KA5 538 aa3.45□□□□□ -1.86
NEB-218ENST00000603639 CNOT6LQ96LI5 555 aaKnown RBP3.45□□□□□ -1.86
NEB-218ENST00000603639 KLHL28Q9NXS3 571 aa3.45□□□□□ -1.86
NEB-218ENST00000603639 CCDC154A6NI56 674 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 RNASEH1O60930 286 aaKnown RBP3.44□□□□□ -1.86
NEB-218ENST00000603639 SLC22A3O75751 556 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 RGS7P49802 495 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 NFIAQ12857 509 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 NFE2L1Q14494 772 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 VEPH1Q14D04 833 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 PGS1Q32NB8 556 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 BRMS1LQ5PSV4 323 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 VWA5B1Q5TIE3 1220 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 SLC22A10Q63ZE4 541 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 KIAA1324Q6UXG2 1013 aaKnown RBP3.44□□□□□ -1.86
NEB-218ENST00000603639 GCNAQ96QF7 691 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 ARPP21Q9UBL0 812 aaPredicted RBP3.44□□□□□ -1.86
NEB-218ENST00000603639 RPL36Q9Y3U8 105 aaKnown RBP3.44□□□□□ -1.86
NEB-218ENST00000603639 UBXN8O00124 270 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 ASNSP08243 561 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 CLUP10909 449 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 NFKB1P19838 968 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 NUDT1P36639 197 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 PTP4A2Q12974 167 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 DUS1LQ6P1R4 473 aaKnown RBP3.44□□□□□ -1.86
NEB-218ENST00000603639 HPS6Q86YV9 775 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 XAGE3Q8WTP9 111 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 BARHL2Q9NY43 387 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 DNAJB9Q9UBS3 223 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 ATP6AP2A0A1C7CYW4 349 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 TMEM114B3SHH9 223 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 GPAA1O43292 621 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 RGS14O43566 566 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 ATP6AP2O75787 350 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 ITGB1P05556 798 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 HDCP19113 662 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 SDC2P34741 201 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 RPA3P35244 121 aaPredicted RBP3.44□□□□□ -1.86
NEB-218ENST00000603639 PRAMEP78395 509 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 TBRG1Q3YBR2 411 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 FASTKD1Q53R41 847 aaKnown RBP3.44□□□□□ -1.86
NEB-218ENST00000603639 C8orf59Q8N0T1 100 aaPredicted RBP3.44□□□□□ -1.86
NEB-218ENST00000603639 NLGN1Q8N2Q7 840 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 ZNF431Q8TF32 576 aaPredicted RBP3.44□□□□□ -1.86
NEB-218ENST00000603639 NCOA5Q9HCD5 579 aaKnown RBP3.44□□□□□ -1.86
NEB-218ENST00000603639 SERPINA3P01011 423 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 RB1P06400 928 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 E2F2Q14209 437 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 NCCRP1Q6ZVX7 275 aaPredicted RBP3.44□□□□□ -1.86
NEB-218ENST00000603639 OR4C6Q8NH72 309 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 NAT14Q8WUY8 206 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 PIGKQ92643 395 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 BCL7BQ9BQE9 202 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 TMEM216Q9P0N5 145 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 ST3GAL5Q9UNP4 418 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 JCADQ9P266 1359 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 EIF2AK2P19525 551 aaKnown RBP3.44□□□□□ -1.86
NEB-218ENST00000603639 CSTF2P33240 577 aaKnown RBP eCLIP3.44□□□□□ -1.86
NEB-218ENST00000603639 PGDP52209 483 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 TMEM31Q5JXX7 168 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 ANGPTL8Q6UXH0 198 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 MCPH1Q8NEM0 835 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 SH3RF3Q8TEJ3 882 aaPredicted RBP3.44□□□□□ -1.86
NEB-218ENST00000603639 TRMT13Q9NUP7 481 aaKnown RBP3.44□□□□□ -1.86
NEB-218ENST00000603639 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.44□□□□□ -1.86
NEB-218ENST00000603639 TMA7Q9Y2S6 64 aaKnown RBP3.44□□□□□ -1.86
NEB-218ENST00000603639 DBTP11182 482 aaKnown RBP3.44□□□□□ -1.86
NEB-218ENST00000603639 PPIBP23284 216 aaKnown RBP3.44□□□□□ -1.86
NEB-218ENST00000603639 S100A3P33764 101 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 PSMC5P62195 406 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 ACOX1Q15067 660 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 CYP51A1Q16850 503 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 TRIM40Q6P9F5 258 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 LRRC74BQ6ZQY2 392 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 EMC1Q8N766 993 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 PIWIL2Q8TC59 973 aaKnown RBP3.44□□□□□ -1.86
NEB-218ENST00000603639 RETREG1Q9H6L5 497 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 DAPK2Q9UIK4 370 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 GRIP1Q9Y3R0 1128 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 CRB1P82279 1406 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 HTR3EA5X5Y0 456 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 PRSS44E7EML9 344 aa3.44□□□□□ -1.86
NEB-218ENST00000603639 FAUP35544 74 aaKnown RBP3.44□□□□□ -1.86
NEB-218ENST00000603639 RGS9BPQ6ZS82 235 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms