RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 STK19P49842 368 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-227ENST00000602011 STX17P56962 302 aa18.31■□□□□ 0.52
SHKBP1-227ENST00000602011 E2F1Q01094 437 aa18.31■□□□□ 0.52
SHKBP1-227ENST00000602011 DLG2Q15700 870 aa18.31■□□□□ 0.52
SHKBP1-227ENST00000602011 EXOC3L4Q17RC7 722 aa18.31■□□□□ 0.52
SHKBP1-227ENST00000602011 HS1BP3Q53T59 392 aa18.31■□□□□ 0.52
SHKBP1-227ENST00000602011 BRMS1LQ5PSV4 323 aa18.31■□□□□ 0.52
SHKBP1-227ENST00000602011 SFMBT2Q5VUG0 894 aa18.31■□□□□ 0.52
SHKBP1-227ENST00000602011 SLC26A9Q7LBE3 791 aa18.31■□□□□ 0.52
SHKBP1-227ENST00000602011 EID2Q8N6I1 236 aa18.31■□□□□ 0.52
SHKBP1-227ENST00000602011 SHC3Q92529 594 aa18.31■□□□□ 0.52
SHKBP1-227ENST00000602011 C2orf49Q9BVC5 232 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-227ENST00000602011 VPS28Q9UK41 221 aa18.31■□□□□ 0.52
SHKBP1-227ENST00000602011 HS3ST2Q9Y278 367 aa18.31■□□□□ 0.52
SHKBP1-227ENST00000602011 COL5A1P20908 1838 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-227ENST00000602011 PLK4O00444 970 aa18.3■□□□□ 0.52
SHKBP1-227ENST00000602011 ACADVLP49748 655 aa18.3■□□□□ 0.52
SHKBP1-227ENST00000602011 CLCN6P51797 869 aa18.3■□□□□ 0.52
SHKBP1-227ENST00000602011 SLC6A3Q01959 620 aa18.3■□□□□ 0.52
SHKBP1-227ENST00000602011 RTP5Q14D33 572 aa18.3■□□□□ 0.52
SHKBP1-227ENST00000602011 TAF5Q15542 800 aa18.3■□□□□ 0.52
SHKBP1-227ENST00000602011 SETD3Q86TU7 594 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-227ENST00000602011 WDTC1Q8N5D0 677 aa18.3■□□□□ 0.52
SHKBP1-227ENST00000602011 SH2D3CQ8N5H7 860 aa18.3■□□□□ 0.52
SHKBP1-227ENST00000602011 TMIEQ8NEW7 156 aa18.3■□□□□ 0.52
SHKBP1-227ENST00000602011 PIP4K2CQ8TBX8 421 aa18.3■□□□□ 0.52
SHKBP1-227ENST00000602011 KLHDC7BQ96G42 594 aa18.3■□□□□ 0.52
SHKBP1-227ENST00000602011 C1orf74Q96LT6 269 aa18.3■□□□□ 0.52
SHKBP1-227ENST00000602011 CPXM1Q96SM3 734 aa18.3■□□□□ 0.52
SHKBP1-227ENST00000602011 SYNCQ9H7C4 482 aa18.3■□□□□ 0.52
SHKBP1-227ENST00000602011 STAP1Q9ULZ2 295 aa18.3■□□□□ 0.52
SHKBP1-227ENST00000602011 OR51B4Q9Y5P0 310 aa18.3■□□□□ 0.52
SHKBP1-227ENST00000602011 PLXNA2O75051 1894 aa18.3■□□□□ 0.52
SHKBP1-227ENST00000602011 SETXQ7Z333 2677 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-227ENST00000602011 EIF4E1BA6NMX2 242 aaKnown RBP18.29■□□□□ 0.52
SHKBP1-227ENST00000602011 BECN2A8MW95 431 aa18.29■□□□□ 0.52
SHKBP1-227ENST00000602011 BIN1O00499 593 aa18.29■□□□□ 0.52
SHKBP1-227ENST00000602011 WNT9AO14904 365 aa18.29■□□□□ 0.52
SHKBP1-227ENST00000602011 ITPKBP27987 946 aa18.29■□□□□ 0.52
SHKBP1-227ENST00000602011 SCNN1AP37088 669 aa18.29■□□□□ 0.52
SHKBP1-227ENST00000602011 ARHGAP44Q17R89 818 aa18.29■□□□□ 0.52
SHKBP1-227ENST00000602011 OR6B2Q6IFH4 312 aa18.29■□□□□ 0.52
SHKBP1-227ENST00000602011 LRRC31Q6UY01 552 aa18.29■□□□□ 0.52
SHKBP1-227ENST00000602011 LRRC69Q6ZNQ3 347 aa18.29■□□□□ 0.52
SHKBP1-227ENST00000602011 RFFLQ8WZ73 363 aa18.29■□□□□ 0.52
SHKBP1-227ENST00000602011 PGAP3Q96FM1 320 aaPredicted RBP18.29■□□□□ 0.52
SHKBP1-227ENST00000602011 CRACR2AQ9BSW2 395 aa18.29■□□□□ 0.52
SHKBP1-227ENST00000602011 WDCPQ9H6R7 721 aa18.29■□□□□ 0.52
SHKBP1-227ENST00000602011 VANGL2Q9ULK5 521 aa18.29■□□□□ 0.52
SHKBP1-227ENST00000602011 HS3ST4Q9Y661 456 aa18.29■□□□□ 0.52
SHKBP1-227ENST00000602011 TP53BP1Q12888 1972 aaPredicted RBP18.29■□□□□ 0.52
SHKBP1-227ENST00000602011 CXorf51AA0A1B0GTR3 108 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 M0QYT0 321 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 RIOK3O14730 519 aaKnown RBP18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 RRP8O43159 456 aaKnown RBP18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 RTN2O75298 545 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 PAGE1O75459 146 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 DAB1O75553 588 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 PRNPP04156 253 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 SLC9A1P19634 815 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 ACP1P24666 158 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 PITX1P78337 314 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 SLC20A2Q08357 652 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 CNTN1Q12860 1018 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 BNIP3Q12983 259 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 DNAJC3Q13217 504 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 NME3Q13232 169 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 ZNF211Q13398 564 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 AGBL4Q5VU57 503 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 FBXL19Q6PCT2 694 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 OLFML1Q6UWY5 402 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 ZSCAN30Q86W11 494 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 DCP2Q8IU60 420 aaKnown RBP18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 IFT43Q96FT9 208 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 MUC3BQ9H195 1237 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 DYRK4Q9NR20 520 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 KLHL11Q9NVR0 708 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 KIAA1468Q9P260 1216 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 SARDHQ9UL12 918 aa18.28■□□□□ 0.52
SHKBP1-227ENST00000602011 HELZ2Q9BYK8 2649 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 SYNJ2BP-COX16A0A087WUM0 186 aa18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 VAV1P15498 845 aa18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 PON1P27169 355 aa18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 ABCG1P45844 678 aa18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 CXCR3P49682 368 aa18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 PPP2CBP62714 309 aa18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 PPP2CAP67775 309 aa18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 TARDBPQ13148 414 aaKnown RBP eCLIP18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 ZNF783Q6ZMS7 281 aa18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 KANSL1Q7Z3B3 1105 aa18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 CIR1Q86X95 450 aaPredicted RBP18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 SPATS2Q86XZ4 545 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 CREBRFQ8IUR6 639 aa18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 MLKLQ8NB16 471 aa18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 ATP11CQ8NB49 1132 aa18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 TMEM35BQ8NCS4 154 aa18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 LSM14AQ8ND56 463 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 BAP1Q92560 729 aa18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 NT5C3BQ969T7 300 aa18.27■□□□□ 0.52
SHKBP1-227ENST00000602011 RETREG1Q9H6L5 497 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms