RNA–Protein interactions for RNA: ENST00000601689.1

UPF1-212, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-212ENST00000601689 LUC7LQ9NQ29 371 aaKnown RBP19.83■□□□□ 0.77
UPF1-212ENST00000601689 SEMA4GQ9NTN9 838 aa19.83■□□□□ 0.77
UPF1-212ENST00000601689 CTTNBP2NLQ9P2B4 639 aa19.83■□□□□ 0.77
UPF1-212ENST00000601689 DNAI1Q9UI46 699 aa19.83■□□□□ 0.77
UPF1-212ENST00000601689 OR51B4Q9Y5P0 310 aa19.83■□□□□ 0.77
UPF1-212ENST00000601689 CXorf51AA0A1B0GTR3 108 aa19.82■□□□□ 0.76
UPF1-212ENST00000601689 PRR5-ARHGAP8B1AHC4 643 aa19.82■□□□□ 0.76
UPF1-212ENST00000601689 C1QTNF3-AMACRE9PGA6 284 aa19.82■□□□□ 0.76
UPF1-212ENST00000601689 ATP9BO43861 1147 aa19.82■□□□□ 0.76
UPF1-212ENST00000601689 ADH1BP00325 375 aa19.82■□□□□ 0.76
UPF1-212ENST00000601689 CYP1A2P05177 515 aa19.82■□□□□ 0.76
UPF1-212ENST00000601689 MIPP30301 263 aa19.82■□□□□ 0.76
UPF1-212ENST00000601689 SSR1P43307 286 aaKnown RBP19.82■□□□□ 0.76
UPF1-212ENST00000601689 NUMBP49757 651 aa19.82■□□□□ 0.76
UPF1-212ENST00000601689 STK19P49842 368 aaPredicted RBP19.82■□□□□ 0.76
UPF1-212ENST00000601689 ARHGAP8P85298 464 aa19.82■□□□□ 0.76
UPF1-212ENST00000601689 DLG2Q15700 870 aa19.82■□□□□ 0.76
UPF1-212ENST00000601689 WDR45BQ5MNZ6 344 aa19.82■□□□□ 0.76
UPF1-212ENST00000601689 MANEALQ5VSG8 457 aa19.82■□□□□ 0.76
UPF1-212ENST00000601689 SH2D3CQ8N5H7 860 aa19.82■□□□□ 0.76
UPF1-212ENST00000601689 TOE1Q96GM8 510 aaKnown RBP19.82■□□□□ 0.76
UPF1-212ENST00000601689 OMDQ99983 421 aa19.82■□□□□ 0.76
UPF1-212ENST00000601689 BTBD1Q9H0C5 482 aa19.82■□□□□ 0.76
UPF1-212ENST00000601689 ZWILCHQ9H900 591 aa19.82■□□□□ 0.76
UPF1-212ENST00000601689 VPS51Q9UID3 782 aa19.82■□□□□ 0.76
UPF1-212ENST00000601689 HS3ST2Q9Y278 367 aa19.82■□□□□ 0.76
UPF1-212ENST00000601689 MUC22E2RYF6 1773 aaPredicted RBP19.82■□□□□ 0.76
UPF1-212ENST00000601689 A0A0D9SEW6 157 aa19.81■□□□□ 0.76
UPF1-212ENST00000601689 ZSCAN5CA6NGD5 496 aaPredicted RBP19.81■□□□□ 0.76
UPF1-212ENST00000601689 GOLGA6L6A8MZA4 724 aa19.81■□□□□ 0.76
UPF1-212ENST00000601689 EEF2KO00418 725 aaKnown RBP19.81■□□□□ 0.76
UPF1-212ENST00000601689 GNSP15586 552 aa19.81■□□□□ 0.76
UPF1-212ENST00000601689 ARL4AP40617 200 aa19.81■□□□□ 0.76
UPF1-212ENST00000601689 YBEYP58557 167 aaPredicted RBP19.81■□□□□ 0.76
UPF1-212ENST00000601689 RPS14P62263 151 aaKnown RBP19.81■□□□□ 0.76
UPF1-212ENST00000601689 ZNF33AQ06730 810 aa19.81■□□□□ 0.76
UPF1-212ENST00000601689 C9orf64Q5T6V5 341 aa19.81■□□□□ 0.76
UPF1-212ENST00000601689 USP30Q70CQ3 517 aa19.81■□□□□ 0.76
UPF1-212ENST00000601689 MMAAQ8IVH4 418 aaKnown RBP19.81■□□□□ 0.76
UPF1-212ENST00000601689 RGL4Q8IZJ4 473 aa19.81■□□□□ 0.76
UPF1-212ENST00000601689 RTL3Q8N8U3 475 aaKnown RBP19.81■□□□□ 0.76
UPF1-212ENST00000601689 CADM4Q8NFZ8 388 aa19.81■□□□□ 0.76
UPF1-212ENST00000601689 OR7D4Q8NG98 312 aa19.81■□□□□ 0.76
UPF1-212ENST00000601689 OR52K2Q8NGK3 314 aa19.81■□□□□ 0.76
UPF1-212ENST00000601689 ZNF564Q8TBZ8 553 aaPredicted RBP19.81■□□□□ 0.76
UPF1-212ENST00000601689 PIGKQ92643 395 aa19.81■□□□□ 0.76
UPF1-212ENST00000601689 PTPRN2Q92932 1015 aa19.81■□□□□ 0.76
UPF1-212ENST00000601689 SGK2Q9HBY8 427 aa19.81■□□□□ 0.76
UPF1-212ENST00000601689 WSB2Q9NYS7 404 aaPredicted RBP19.81■□□□□ 0.76
UPF1-212ENST00000601689 MBD1Q9UIS9 605 aaPredicted RBP19.81■□□□□ 0.76
UPF1-212ENST00000601689 OTOGLQ3ZCN5 2332 aa19.81■□□□□ 0.76
UPF1-212ENST00000601689 BCLAF3A2AJT9 711 aaKnown RBP19.8■□□□□ 0.76
UPF1-212ENST00000601689 MEI4A8MW99 385 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 FAM72CH0Y354 149 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 KHNYNO15037 678 aaKnown RBP19.8■□□□□ 0.76
UPF1-212ENST00000601689 ALOX15BO15296 676 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 BNIP3LO60238 219 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 LRCH4O75427 683 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 IPO7O95373 1038 aaKnown RBP19.8■□□□□ 0.76
UPF1-212ENST00000601689 IL1BP01584 269 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 IGLV3-19P01714 112 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 ZNF806P0C7X5 589 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 C5AR1P21730 350 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 HOXD12P35452 270 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 ZNF75DP51815 510 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 TBX2Q13207 712 aaPredicted RBP19.8■□□□□ 0.76
UPF1-212ENST00000601689 CST6Q15828 149 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 AASDHQ4L235 1098 aaPredicted RBP19.8■□□□□ 0.76
UPF1-212ENST00000601689 PPP6R3Q5H9R7 873 aaPredicted RBP19.8■□□□□ 0.76
UPF1-212ENST00000601689 FAM72AQ5TYM5 149 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 FAM72DQ6L9T8 149 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 NLRP14Q86W24 1093 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 FAM72BQ86X60 149 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 SYT12Q8IV01 421 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 PYROXD2Q8N2H3 581 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 NIPA2Q8N8Q9 360 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 CEP76Q8TAP6 659 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 SNRNP25Q9BV90 132 aaKnown RBP19.8■□□□□ 0.76
UPF1-212ENST00000601689 GPR174Q9BXC1 333 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 PCED1AQ9H1Q7 454 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 FBXL12Q9NXK8 326 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 SUSD2Q9UGT4 822 aa19.8■□□□□ 0.76
UPF1-212ENST00000601689 EP300Q09472 2414 aaPredicted RBP19.8■□□□□ 0.76
UPF1-212ENST00000601689 WASH4PA8MWX3 477 aa19.79■□□□□ 0.76
UPF1-212ENST00000601689 SNAP91O60641 907 aa19.79■□□□□ 0.76
UPF1-212ENST00000601689 TMEM253P0C7T8 217 aa19.79■□□□□ 0.76
UPF1-212ENST00000601689 SRCP12931 536 aa19.79■□□□□ 0.76
UPF1-212ENST00000601689 SLC8A1P32418 973 aa19.79■□□□□ 0.76
UPF1-212ENST00000601689 PARP15Q460N3 678 aa19.79■□□□□ 0.76
UPF1-212ENST00000601689 PRR23CQ6ZRP0 262 aa19.79■□□□□ 0.76
UPF1-212ENST00000601689 ARMCX6Q7L4S7 300 aa19.79■□□□□ 0.76
UPF1-212ENST00000601689 FAM124AQ86V42 546 aa19.79■□□□□ 0.76
UPF1-212ENST00000601689 RHOT2Q8IXI1 618 aa19.79■□□□□ 0.76
UPF1-212ENST00000601689 STK40Q8N2I9 435 aa19.79■□□□□ 0.76
UPF1-212ENST00000601689 FRMD1Q8N878 549 aa19.79■□□□□ 0.76
UPF1-212ENST00000601689 ARHGEF2Q92974 986 aaKnown RBP19.79■□□□□ 0.76
UPF1-212ENST00000601689 PSMB7Q99436 277 aa19.79■□□□□ 0.76
UPF1-212ENST00000601689 CHP1Q99653 195 aa19.79■□□□□ 0.76
UPF1-212ENST00000601689 NUSAP1Q9BXS6 441 aaKnown RBP19.79■□□□□ 0.76
UPF1-212ENST00000601689 CEP44Q9C0F1 390 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms