RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 PAX3P23760 479 aa12.42□□□□□ -0.42
SHANK2-218ENST00000601538 TAF5Q15542 800 aa12.42□□□□□ -0.42
SHANK2-218ENST00000601538 ZNF423Q2M1K9 1284 aa12.42□□□□□ -0.42
SHANK2-218ENST00000601538 FGD3Q5JSP0 725 aa12.42□□□□□ -0.42
SHANK2-218ENST00000601538 NACC2Q96BF6 587 aa12.42□□□□□ -0.42
SHANK2-218ENST00000601538 ACAT2Q9BWD1 397 aa12.42□□□□□ -0.42
SHANK2-218ENST00000601538 YTHDF1Q9BYJ9 559 aaKnown RBP12.42□□□□□ -0.42
SHANK2-218ENST00000601538 IKZF3Q9UKT9 509 aa12.42□□□□□ -0.42
SHANK2-218ENST00000601538 USP17L8P0C7I0 530 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 ARF4P18085 180 aaPredicted RBP12.41□□□□□ -0.42
SHANK2-218ENST00000601538 ANKRD26P1Q6NSI1 321 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 FBXW8Q8N3Y1 598 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 OR56A4Q8NGH8 313 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 TBC1D13Q9NVG8 400 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 RGSL1A5PLK6 1076 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 SMTNL2Q2TAL5 461 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 CLYBLQ8N0X4 340 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 SRBD1Q8N5C6 995 aaKnown RBP12.41□□□□□ -0.42
SHANK2-218ENST00000601538 AP1S3Q96PC3 154 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 YME1L1Q96TA2 773 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 TTYH1Q9H313 450 aaPredicted RBP12.41□□□□□ -0.42
SHANK2-218ENST00000601538 MARCH7Q9H992 704 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 NAGPAQ9UK23 515 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 PNPLA6Q8IY17 1366 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 NOTOA8MTQ0 251 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 AP3D1O14617 1153 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 CHST10O43529 356 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 BGNP21810 368 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 DLG1Q12959 904 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 PERM1Q5SV97 790 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 TDRD1Q9BXT4 1180 aaKnown RBP12.41□□□□□ -0.42
SHANK2-218ENST00000601538 SP140LQ9H930 580 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 PRDM16Q9HAZ2 1276 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 TRPC4Q9UBN4 977 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 FLT1P17948 1338 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 CASP1P29466 404 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 OMPP47874 163 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 GPR15P49685 360 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 NRF1Q16656 503 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 SPERTQ8NA61 448 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 SPIRE2Q8WWL2 714 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 VMP1Q96GC9 406 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 MAP3K14Q99558 947 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 NLNQ9BYT8 704 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 NMRK2Q9NPI5 230 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 PSMD13Q9UNM6 376 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 NFAT5O94916 1531 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 SCGNO76038 276 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 GJB6O95452 261 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 SLC9A3P48764 834 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 USP6P35125 1406 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 PRDX6P30041 224 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 EPHA7Q15375 998 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 PKN1Q16512 942 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 PIK3R3Q92569 461 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 AKAP1Q92667 903 aaKnown RBP eCLIP12.41□□□□□ -0.42
SHANK2-218ENST00000601538 SLITRK1Q96PX8 696 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 FETUBQ9UGM5 382 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 OVOS2A0A0J9YW53 1432 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 OVOS2Q6IE36 1432 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 A0A088AWK7 358 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 ZNF10P21506 573 aaPredicted RBP12.41□□□□□ -0.42
SHANK2-218ENST00000601538 NR4A1P22736 598 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 USP46P62068 366 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 BNIP1Q12981 228 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 TAF13Q15543 124 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 SLC9A4Q6AI14 798 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 ADAM33Q9BZ11 813 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 XKR8Q9H6D3 395 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 TMEM165Q9HC07 324 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 SCUBE2Q9NQ36 999 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.41□□□□□ -0.42
SHANK2-218ENST00000601538 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.41□□□□□ -0.421e-6■■■■□ 23.6
SHANK2-218ENST00000601538 VPS4AQ9UN37 437 aa12.41□□□□□ -0.42
SHANK2-218ENST00000601538 FAM237AA0A1B0GTK4 181 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 AVPR1AP37288 418 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 RPRD1AQ96P16 312 aaPredicted RBP12.4□□□□□ -0.42
SHANK2-218ENST00000601538 ZMYM2Q9UBW7 1377 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 RBM47A0AV96 593 aaKnown RBP12.4□□□□□ -0.42
SHANK2-218ENST00000601538 USP17L5A8MUK1 530 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 CYP2A7P20853 494 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 CD151P48509 253 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 RGS1Q08116 209 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 PPP1R15BQ5SWA1 713 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 GPALPP1Q8IXQ4 340 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 TRIM2Q9C040 744 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 TNPO3Q9Y5L0 923 aaKnown RBP12.4□□□□□ -0.42
SHANK2-218ENST00000601538 SQLEQ14534 574 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 CDRT15Q96T59 188 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 ACTR8Q9H981 624 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 GMPPBQ9Y5P6 360 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 ZCCHC11Q5TAX3 1644 aaKnown RBP12.4□□□□□ -0.42
SHANK2-218ENST00000601538 FAM240BA0A1B0GVZ2 78 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 MED24O75448 989 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 HIST1H2ABP04908 130 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 HIST3H2AQ7L7L0 130 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 ATP6V0D2Q8N8Y2 350 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 ZNF540Q8NDQ6 660 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 MCFD2Q8NI22 146 aa12.4□□□□□ -0.42
SHANK2-218ENST00000601538 PYDC1Q8WXC3 89 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms