RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 TMA16Q96EY4 203 aaKnown RBP13.05□□□□□ -0.32
ZNF548-210ENST00000600442 CELF6Q96J87 481 aaKnown RBP13.05□□□□□ -0.32
ZNF548-210ENST00000600442 MSLNLQ96KJ4 702 aa13.05□□□□□ -0.32
ZNF548-210ENST00000600442 GDAP1L1Q96MZ0 367 aa13.05□□□□□ -0.32
ZNF548-210ENST00000600442 ZNF599Q96NL3 588 aa13.05□□□□□ -0.32
ZNF548-210ENST00000600442 CYP2S1Q96SQ9 504 aa13.05□□□□□ -0.32
ZNF548-210ENST00000600442 RBM15Q96T37 977 aaKnown RBP eCLIP13.05□□□□□ -0.32
ZNF548-210ENST00000600442 LRRC3Q9BY71 257 aa13.05□□□□□ -0.32
ZNF548-210ENST00000600442 PABPC3Q9H361 631 aaKnown RBP13.05□□□□□ -0.32
ZNF548-210ENST00000600442 KIF9Q9HAQ2 790 aa13.05□□□□□ -0.32
ZNF548-210ENST00000600442 XAB2Q9HCS7 855 aaKnown RBP13.05□□□□□ -0.32
ZNF548-210ENST00000600442 MED4Q9NPJ6 270 aa13.05□□□□□ -0.32
ZNF548-210ENST00000600442 EIF2B3Q9NR50 452 aaKnown RBP13.05□□□□□ -0.32
ZNF548-210ENST00000600442 CFAP97Q9P2B7 532 aa13.05□□□□□ -0.32
ZNF548-210ENST00000600442 RSPH14Q9UHP6 348 aa13.05□□□□□ -0.32
ZNF548-210ENST00000600442 XPO7Q9UIA9 1087 aaKnown RBP13.05□□□□□ -0.32
ZNF548-210ENST00000600442 AAR2Q9Y312 384 aaKnown RBP13.05□□□□□ -0.32
ZNF548-210ENST00000600442 PTPRZ1P23471 2315 aaPredicted RBP13.05□□□□□ -0.32
ZNF548-210ENST00000600442 KMT2EQ8IZD2 1858 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 ILVBLA1L0T0 632 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 RASA4BC9J798 803 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 H0Y626 953 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 RASA4O43374 803 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 RFPL2O75678 378 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 ANXA9O76027 345 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 RHOCP08134 193 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 FAM153BP0C7A2 387 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 ETS1P14921 441 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 HOXB8P17481 243 aaPredicted RBP13.04□□□□□ -0.32
ZNF548-210ENST00000600442 TPSB2P20231 275 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 PHBP35232 272 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 PAPOLAP51003 745 aaKnown RBP13.04□□□□□ -0.32
ZNF548-210ENST00000600442 GDF10P55107 478 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 TPSAB1Q15661 275 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 FAM153CQ494X1 144 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 TEX44Q53QW1 395 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 MPP7Q5T2T1 576 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 MARC1Q5VT66 337 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 AFMIDQ63HM1 303 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 LRIG3Q6UXM1 1119 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 TRIM67Q6ZTA4 783 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 NLRP14Q86W24 1093 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 RELL1Q8IUW5 271 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 ZNF683Q8IZ20 524 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 CNPY4Q8N129 248 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 CPXM2Q8N436 756 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 NPWQ8N729 165 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 MCUQ8NE86 351 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 TTC16Q8NEE8 873 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 PRSS33Q8NF86 280 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 OTUB2Q96DC9 234 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 LRRC39Q96DD0 335 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 STMN4Q9H169 189 aaPredicted RBP13.04□□□□□ -0.32
ZNF548-210ENST00000600442 C10orf88Q9H8K7 445 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 TDP1Q9NUW8 608 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 CLEC1BQ9P126 229 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 IGSF9Q9P2J2 1179 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 DNMT3BQ9UBC3 853 aaKnown RBP13.04□□□□□ -0.32
ZNF548-210ENST00000600442 FAM153AQ9UHL3 310 aa13.04□□□□□ -0.32
ZNF548-210ENST00000600442 IPO11Q9UI26 975 aaKnown RBP13.04□□□□□ -0.32
ZNF548-210ENST00000600442 CFAP54Q96N23 3096 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 TMEM221A6NGB7 291 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 M0R296 226 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 MAP2K7O14733 419 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 SPAG6O75602 509 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 JCHAINP01591 159 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 IVLP07476 585 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 TSHRP16473 764 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 ECHS1P30084 290 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 MAGEA6P43360 314 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 GEMIN4P57678 1058 aaKnown RBP13.03□□□□□ -0.32
ZNF548-210ENST00000600442 IFI35P80217 286 aaPredicted RBP13.03□□□□□ -0.32
ZNF548-210ENST00000600442 IL10RBQ08334 325 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 SEMA5AQ13591 1074 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 CDH18Q13634 790 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 HNRNPDQ14103 355 aaKnown RBP13.03□□□□□ -0.32
ZNF548-210ENST00000600442 RFTN1Q14699 578 aaPredicted RBP13.03□□□□□ -0.32
ZNF548-210ENST00000600442 FAM133BQ5BKY9 247 aaKnown RBP13.03□□□□□ -0.32
ZNF548-210ENST00000600442 IL31Q6EBC2 164 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 NADSYN1Q6IA69 706 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 GRASPQ7Z6J2 395 aaPredicted RBP13.03□□□□□ -0.32
ZNF548-210ENST00000600442 ADGRD2Q7Z7M1 963 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 LINC00523Q86TU6 105 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 SHKBP1Q8TBC3 707 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 SH3RF2Q8TEC5 729 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 IGSF8Q969P0 613 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 SLC46A2Q9BY10 475 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 SLC39A8Q9C0K1 460 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 ADAM7Q9H2U9 754 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 MFHAS1Q9Y4C4 1052 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 FARP1Q9Y4F1 1045 aaPredicted RBP13.03□□□□□ -0.32
ZNF548-210ENST00000600442 ZFP37Q9Y6Q3 630 aaPredicted RBP13.03□□□□□ -0.32
ZNF548-210ENST00000600442 MYO16Q9Y6X6 1858 aa13.03□□□□□ -0.32
ZNF548-210ENST00000600442 GOLGA6L7A0A1B0GV03 622 aa13.02□□□□□ -0.33
ZNF548-210ENST00000600442 KCNK1O00180 336 aa13.02□□□□□ -0.33
ZNF548-210ENST00000600442 LEFTY2O00292 366 aa13.02□□□□□ -0.33
ZNF548-210ENST00000600442 KLKB1P03952 638 aa13.02□□□□□ -0.33
ZNF548-210ENST00000600442 MLNP12872 115 aa13.02□□□□□ -0.33
ZNF548-210ENST00000600442 CES1P23141 567 aa13.02□□□□□ -0.33
ZNF548-210ENST00000600442 PTPN3P26045 913 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms