RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 NRG1Q02297 640 aaPredicted RBP14.5□□□□□ -0.09
LIG1-218ENST00000599322 TEAD4Q15561 434 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 DLG2Q15700 870 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 UAP1L1Q3KQV9 507 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 ALFQ53S48 1182 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 C9orf64Q5T6V5 341 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 ZNF354CQ86Y25 554 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 SLC41A1Q8IVJ1 513 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 STK40Q8N2I9 435 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 DCAF4L2Q8NA75 395 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 CENPIQ92674 756 aaPredicted RBP14.5□□□□□ -0.09
LIG1-218ENST00000599322 SYN2Q92777 582 aaPredicted RBP14.5□□□□□ -0.09
LIG1-218ENST00000599322 NTAN1Q96AB6 310 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 SKA1Q96BD8 255 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 TBC1D31Q96DN5 1066 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 EPAS1Q99814 870 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 ZDHHC5Q9C0B5 715 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 ATP13A1Q9HD20 1204 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 DYRK4Q9NR20 520 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 TMEM74BQ9NUR3 256 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 TPX2Q9ULW0 747 aaKnown RBP14.5□□□□□ -0.09
LIG1-218ENST00000599322 SNX10Q9Y5X0 201 aa14.5□□□□□ -0.09
LIG1-218ENST00000599322 LNP1A1A4G5 178 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 FAM47DPA6NHR8 397 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 PATE3B3GLJ2 98 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 CBX4O00257 560 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 ALOX15BO15296 676 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 ATP9BO43861 1147 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 FSBPO95073 299 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 GJB6O95452 261 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 SERPING1P05155 500 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 PLEKP08567 350 aaPredicted RBP14.49□□□□□ -0.09
LIG1-218ENST00000599322 ENGP17813 658 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 PSMA2P25787 234 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 MAPKAPK2P49137 400 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 NUMBP49757 651 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 NFKBIBQ15653 356 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 PEAR1Q5VY43 1037 aaPredicted RBP14.49□□□□□ -0.09
LIG1-218ENST00000599322 TRNP1Q6NT89 227 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 BNIPLQ7Z465 357 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 DRC7Q8IY82 874 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 SH2D3CQ8N5H7 860 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 DNASE2BQ8WZ79 361 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 PTPRN2Q92932 1015 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 MYO19Q96H55 970 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 ADAM33Q9BZ11 813 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 MTG2Q9H4K7 406 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 SLC32A1Q9H598 525 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 CATSPERBQ9H7T0 1116 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 CD93Q9NPY3 652 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 ZNHIT6Q9NWK9 470 aaKnown RBP14.49□□□□□ -0.09
LIG1-218ENST00000599322 CNOT8Q9UFF9 292 aaKnown RBP14.49□□□□□ -0.09
LIG1-218ENST00000599322 FZD4Q9ULV1 537 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 CHD8Q9HCK8 2581 aa14.49□□□□□ -0.09
LIG1-218ENST00000599322 ARHGAP33O14559 1287 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 MID1O15344 667 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 BCAT2O15382 392 aaPredicted RBP14.48□□□□□ -0.09
LIG1-218ENST00000599322 CCP110O43303 1012 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 OPHN1O60890 802 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 RAMP2O60895 175 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 SKILP12757 684 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 GOT1P17174 413 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 MAOBP27338 520 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 L1CAMP32004 1257 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 ACSL1P33121 698 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 IRAK1P51617 712 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 HDAC4P56524 1084 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 GNA12Q03113 381 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 SH3PXD2AQ5TCZ1 1133 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 IL27RAQ6UWB1 636 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 ZNF571Q7Z3V5 609 aaPredicted RBP14.48□□□□□ -0.09
LIG1-218ENST00000599322 TMC6Q7Z403 805 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 ADAT2Q7Z6V5 191 aaKnown RBP14.48□□□□□ -0.09
LIG1-218ENST00000599322 ZNF683Q8IZ20 524 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 ZNF653Q96CK0 615 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 ALG14Q96F25 216 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 MAGEH1Q9H213 219 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 ANLNQ9NQW6 1124 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 TMPRSS4Q9NRS4 437 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 EIF2B4Q9UI10 523 aaKnown RBP14.48□□□□□ -0.09
LIG1-218ENST00000599322 VPS51Q9UID3 782 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 CAPN11Q9UMQ6 739 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 HS3ST2Q9Y278 367 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 OR51B4Q9Y5P0 310 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 PI4KAP42356 2102 aa14.48□□□□□ -0.09
LIG1-218ENST00000599322 ADAMTS9Q9P2N4 1935 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 A0A1W2PP55 124 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 EIF3CLB5ME19 914 aaKnown RBP14.47□□□□□ -0.09
LIG1-218ENST00000599322 MCF2LO15068 1137 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 DAPK3O43293 454 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 CREB3O43889 395 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 PRPSAP2O60256 369 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 PRNPP04156 253 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 C7P10643 843 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 EPHB2P29323 1055 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 HTR7P34969 479 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 DNA2P51530 1060 aa14.47□□□□□ -0.09
LIG1-218ENST00000599322 AFF3P51826 1226 aaKnown RBP14.47□□□□□ -0.09
LIG1-218ENST00000599322 RPL7AP62424 266 aaKnown RBP14.47□□□□□ -0.09
LIG1-218ENST00000599322 SCAPQ12770 1279 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms