RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 GRIK2Q13002 908 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 ELAVL3Q14576 367 aaKnown RBP12.46□□□□□ -0.41
LIG1-217ENST00000599165 DLG2Q15700 870 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 WDR45BQ5MNZ6 344 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 SYCP2LQ5T4T6 812 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 PSAPL1Q6NUJ1 521 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 LAYNQ6UX15 382 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 Q6ZVU0 165 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 ZNF571Q7Z3V5 609 aaPredicted RBP12.46□□□□□ -0.41
LIG1-217ENST00000599165 SETD3Q86TU7 594 aaPredicted RBP12.46□□□□□ -0.41
LIG1-217ENST00000599165 MINDY1Q8N5J2 469 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 ARFGAP1Q8N6T3 406 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 DCAF4L2Q8NA75 395 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 FAM172AQ8WUF8 416 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 BTBD1Q9H0C5 482 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 OSBPL2Q9H1P3 480 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 SGK2Q9HBY8 427 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 DNAAF2Q9NVR5 837 aaKnown RBP12.46□□□□□ -0.41
LIG1-217ENST00000599165 FBXL12Q9NXK8 326 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 AIPL1Q9NZN9 384 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 PPARGC1AQ9UBK2 798 aaKnown RBP12.46□□□□□ -0.41
LIG1-217ENST00000599165 VPS28Q9UK41 221 aa12.46□□□□□ -0.41
LIG1-217ENST00000599165 CEP295Q9C0D2 2601 aa12.46□□□□□ -0.42
LIG1-217ENST00000599165 WNT9AO14904 365 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 BCAT2O15382 392 aaPredicted RBP12.45□□□□□ -0.42
LIG1-217ENST00000599165 SRGAP2O75044 1071 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 LRIG2O94898 1065 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 CALB1P05937 261 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 CSRP1P21291 193 aaKnown RBP12.45□□□□□ -0.42
LIG1-217ENST00000599165 PMLP29590 882 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 ZNF143P52747 638 aaPredicted RBP12.45□□□□□ -0.42
LIG1-217ENST00000599165 FANCCQ00597 558 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 GFPT1Q06210 699 aaPredicted RBP12.45□□□□□ -0.42
LIG1-217ENST00000599165 SCAPQ12770 1279 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 UAP1L1Q3KQV9 507 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 TTC31Q49AM3 519 aaPredicted RBP12.45□□□□□ -0.42
LIG1-217ENST00000599165 KCNT1Q5JUK3 1230 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 DAB2IPQ5VWQ8 1189 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 KIAA0895LQ68EN5 471 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 NCEH1Q6PIU2 408 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 LINGO4Q6UY18 593 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 RABEPKQ7Z6M1 372 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 PYROXD2Q8N2H3 581 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 OR2A12Q8NGT7 310 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 NTAN1Q96AB6 310 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 MCEEQ96PE7 176 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 SELENOOQ9BVL4 669 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 GTPBP2Q9BX10 602 aaKnown RBP12.45□□□□□ -0.42
LIG1-217ENST00000599165 TRIM7Q9C029 511 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 ZYG11BQ9C0D3 744 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 MUC3BQ9H195 1237 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 MIR1-1HGQ9H1L0 117 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 HAUS4Q9H6D7 363 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 NOL6Q9H6R4 1146 aaKnown RBP12.45□□□□□ -0.42
LIG1-217ENST00000599165 IL21RQ9HBE5 538 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 SEPT11Q9NVA2 429 aaKnown RBP12.45□□□□□ -0.42
LIG1-217ENST00000599165 TMEM51Q9NW97 253 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 OR12D3Q9UGF7 316 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 SUSD2Q9UGT4 822 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 PPM1HQ9ULR3 514 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 FZD4Q9ULV1 537 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 SCML1Q9UN30 329 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 WASF3Q9UPY6 502 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 PAXBP1Q9Y5B6 917 aa12.45□□□□□ -0.42
LIG1-217ENST00000599165 EPG5Q9HCE0 2579 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 ILVBLA1L0T0 632 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 UPK3BL1B0FP48 263 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 UPK3BL2E5RIL1 263 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 MCF2LO15068 1137 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 ATMINO43313 823 aaPredicted RBP12.44□□□□□ -0.42
LIG1-217ENST00000599165 GOT1P17174 413 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 C5AR1P21730 350 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 OR1E1P30953 314 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 ACVRL1P37023 503 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 NOVA1P51513 510 aaKnown RBP12.44□□□□□ -0.42
LIG1-217ENST00000599165 ADPRHP54922 357 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 TAS2R38P59533 333 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 PPP2CBP62714 309 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 PPP2CAP67775 309 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 FAM193AP78312 1265 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 MAMLD1Q13495 774 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 ZSCAN23Q3MJ62 389 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 FIGNQ5HY92 759 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 C6orf118Q5T5N4 469 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 ACBD5Q5T8D3 534 aaPredicted RBP12.44□□□□□ -0.42
LIG1-217ENST00000599165 AGBL4Q5VU57 503 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 HGSNATQ68CP4 663 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 PLEKHA7Q6IQ23 1121 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 DNAJC24Q6P3W2 148 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 LRRC31Q6UY01 552 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 CYP4V2Q6ZWL3 525 aaPredicted RBP12.44□□□□□ -0.42
LIG1-217ENST00000599165 HDDC3Q8N4P3 179 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 CHST14Q8NCH0 376 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 DEFB124Q8NES8 71 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 ACE2Q9BYF1 805 aaPredicted RBP12.44□□□□□ -0.42
LIG1-217ENST00000599165 TM9SF3Q9HD45 589 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 OSGEPQ9NPF4 335 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 TMEM248Q9NWD8 314 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 SLC25A13Q9UJS0 675 aa12.44□□□□□ -0.42
LIG1-217ENST00000599165 ARID1BQ8NFD5 2236 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms