RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.39■□□□□ 0.37
SHKBP1-216ENST00000598201 ERI2A8K979 691 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-216ENST00000598201 TLR5O60602 858 aa17.39■□□□□ 0.37
SHKBP1-216ENST00000598201 SEC24AO95486 1093 aa17.39■□□□□ 0.37
SHKBP1-216ENST00000598201 NIPAL4Q0D2K0 466 aa17.39■□□□□ 0.37
SHKBP1-216ENST00000598201 CERCAMQ5T4B2 595 aa17.39■□□□□ 0.37
SHKBP1-216ENST00000598201 CGB2Q6NT52 195 aa17.39■□□□□ 0.37
SHKBP1-216ENST00000598201 FBXL22Q6P050 247 aa17.39■□□□□ 0.37
SHKBP1-216ENST00000598201 MICALCLQ6ZW33 695 aa17.39■□□□□ 0.37
SHKBP1-216ENST00000598201 CCNJLQ8IV13 435 aa17.39■□□□□ 0.37
SHKBP1-216ENST00000598201 ATP6V0D2Q8N8Y2 350 aa17.39■□□□□ 0.37
SHKBP1-216ENST00000598201 DNAAF3Q8N9W5 541 aa17.39■□□□□ 0.37
SHKBP1-216ENST00000598201 CCDC197Q8NCU1 140 aa17.39■□□□□ 0.37
SHKBP1-216ENST00000598201 TTC17Q96AE7 1141 aa17.39■□□□□ 0.37
SHKBP1-216ENST00000598201 ALKBH8Q96BT7 664 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-216ENST00000598201 MYEOVQ96EZ4 313 aa17.39■□□□□ 0.37
SHKBP1-216ENST00000598201 NSRP1Q9H0G5 558 aaKnown RBP17.39■□□□□ 0.37
SHKBP1-216ENST00000598201 IGLV3-10A0A075B6K4 115 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 SNX3O60493 162 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 KRT37O76014 449 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 RHOQP17081 205 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 NEK3P51956 506 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 HHATQ5VTY9 493 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 KIAA1841Q6NSI8 718 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 KLHDC8BQ8IXV7 354 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 PHOSPHO2Q8TCD6 241 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 NAT9Q9BTE0 207 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 ZYG11BQ9C0D3 744 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 SAMD15Q9P1V8 674 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 RPS6KL1Q9Y6S9 549 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 GOLGA6L7A0A1B0GV03 622 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 LPXNO60711 386 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 RFPL1O75677 317 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 MT-CYBP00156 380 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 OAS1P00973 400 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 TPH1P17752 444 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 KCNQ1P51787 676 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 PDK4Q16654 411 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 SPOUT1Q5T280 376 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 MROH9Q5TGP6 573 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 NADSYN1Q6IA69 706 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 FAM47EQ6ZV65 393 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 CIR1Q86X95 450 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 UMODL1-AS1Q8N2C9 162 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 ZNF276Q8N554 614 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 ZNF689Q96CS4 500 aaPredicted RBP17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 APOPT1Q96IL0 206 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 PPARGC1AQ9UBK2 798 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 IPO11Q9UI26 975 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 PSAT1Q9Y617 370 aa17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 LAMA2P24043 3122 aaKnown RBP17.38■□□□□ 0.37
SHKBP1-216ENST00000598201 HLA-DQB2P05538 268 aa17.37■□□□□ 0.37
SHKBP1-216ENST00000598201 ERVK-10P10266 1014 aa17.37■□□□□ 0.37
SHKBP1-216ENST00000598201 DNAJC3Q13217 504 aa17.37■□□□□ 0.37
SHKBP1-216ENST00000598201 PRPSAP1Q14558 356 aa17.37■□□□□ 0.37
SHKBP1-216ENST00000598201 CDHR3Q6ZTQ4 885 aa17.37■□□□□ 0.37
SHKBP1-216ENST00000598201 MARK2Q7KZI7 788 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-216ENST00000598201 TDHQ8IZJ6 230 aa17.37■□□□□ 0.37
SHKBP1-216ENST00000598201 HMCESQ96FZ2 354 aa17.37■□□□□ 0.37
SHKBP1-216ENST00000598201 PRO3102Q9H379 93 aa17.37■□□□□ 0.37
SHKBP1-216ENST00000598201 LRRC40Q9H9A6 602 aa17.37■□□□□ 0.37
SHKBP1-216ENST00000598201 RC3H2Q9HBD1 1191 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-216ENST00000598201 GLOD4Q9HC38 313 aa17.37■□□□□ 0.37
SHKBP1-216ENST00000598201 RBM22Q9NW64 420 aaKnown RBP eCLIP17.37■□□□□ 0.37
SHKBP1-216ENST00000598201 TMEM248Q9NWD8 314 aa17.37■□□□□ 0.37
SHKBP1-216ENST00000598201 BFARQ9NZS9 450 aa17.37■□□□□ 0.37
SHKBP1-216ENST00000598201 ZNF212Q9UDV6 495 aa17.37■□□□□ 0.37
SHKBP1-216ENST00000598201 ATXN2Q99700 1313 aaKnown RBP17.37■□□□□ 0.37
SHKBP1-216ENST00000598201 TM9SF1O15321 606 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 ATP9BO43861 1147 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 KRT38O76015 456 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 PEX11BO96011 259 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 SOD2P04179 222 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 POLBP06746 335 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 CORO7P57737 925 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 LGSNQ5TDP6 509 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 RGS9BPQ6ZS82 235 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 FCRL5Q96RD9 977 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 SLCO1B3Q9NPD5 702 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 DOCK4Q8N1I0 1966 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 WDR91A4D1P6 747 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 DRGXA6NNA5 263 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 GJB5O95377 273 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 HMGA1P17096 107 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 ETV4P43268 484 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 TUFMP49411 452 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 RING1Q06587 406 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 SPANXN3Q5MJ09 141 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 YTHDF3Q7Z739 585 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 TMEM135Q86UB9 458 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 HERC6Q8IVU3 1022 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 SLC39A11Q8N1S5 342 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 ZNF669Q96BR6 464 aaPredicted RBP17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 ZBED2Q9BTP6 218 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 FNIP2Q9P278 1114 aa17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 AFF4Q9UHB7 1163 aaKnown RBP17.36■□□□□ 0.37
SHKBP1-216ENST00000598201 ZCWPW2A0A1B0GU75 182 aa17.35■□□□□ 0.37
SHKBP1-216ENST00000598201 J3KR12 359 aa17.35■□□□□ 0.37
SHKBP1-216ENST00000598201 ABLIM3O94929 683 aa17.35■□□□□ 0.37
SHKBP1-216ENST00000598201 NDST2P52849 883 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms