RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 MYO18BQ8IUG5 2567 aa16.95■□□□□ 0.3
SHKBP1-215ENST00000597649 TEX51A0A1B0GUA7 166 aa16.94■□□□□ 0.3
SHKBP1-215ENST00000597649 PLRG1O43660 514 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-215ENST00000597649 PDGFRAP16234 1089 aa16.94■□□□□ 0.3
SHKBP1-215ENST00000597649 ACTN2P35609 894 aa16.94■□□□□ 0.3
SHKBP1-215ENST00000597649 GPD2P43304 727 aa16.94■□□□□ 0.3
SHKBP1-215ENST00000597649 MTIF2P46199 727 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-215ENST00000597649 CXADRP78310 365 aa16.94■□□□□ 0.3
SHKBP1-215ENST00000597649 KCNH2Q12809 1159 aa16.94■□□□□ 0.3
SHKBP1-215ENST00000597649 CNTN1Q12860 1018 aa16.94■□□□□ 0.3
SHKBP1-215ENST00000597649 ZNF211Q13398 564 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-215ENST00000597649 EIF4EBP2Q13542 120 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-215ENST00000597649 AGBL4Q5VU57 503 aa16.94■□□□□ 0.3
SHKBP1-215ENST00000597649 LMO3Q8TAP4 145 aa16.94■□□□□ 0.3
SHKBP1-215ENST00000597649 FAM149B1Q96BN6 582 aa16.94■□□□□ 0.3
SHKBP1-215ENST00000597649 NAF1Q96HR8 494 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-215ENST00000597649 SPAG5Q96R06 1193 aa16.94■□□□□ 0.3
SHKBP1-215ENST00000597649 PRMT1Q99873 361 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-215ENST00000597649 KDM4CQ9H3R0 1056 aa16.94■□□□□ 0.3
SHKBP1-215ENST00000597649 PPM1HQ9ULR3 514 aa16.94■□□□□ 0.3
SHKBP1-215ENST00000597649 COL6A6A6NMZ7 2263 aa16.94■□□□□ 0.3
SHKBP1-215ENST00000597649 IGLV3-25P01717 112 aa16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 GIMD1P0DJR0 217 aa16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 CDK11BP21127 795 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 DGKAP23743 735 aa16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 FMO5P49326 533 aa16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 PLK1P53350 603 aa16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 TAS2R38P59533 333 aa16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 CFHR1Q03591 330 aa16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 OVGP1Q12889 678 aa16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 STAT4Q14765 748 aa16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 HSP90AA4PQ58FG1 418 aa16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 CXorf57Q6NSI4 855 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 RRAGAQ7L523 313 aa16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 TRIM69Q86WT6 500 aa16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 CHSY1Q86X52 802 aa16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 CCAR2Q8N163 923 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 ANKRD20A12PQ8NF67 263 aa16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 OR52K2Q8NGK3 314 aa16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 ALG14Q96F25 216 aa16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 HIC2Q96JB3 615 aa16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 SAMSN1Q9NSI8 373 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 FANCLQ9NW38 375 aa16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 DMTF1Q9Y222 760 aa16.93■□□□□ 0.3
SHKBP1-215ENST00000597649 CYSRT1A8MQ03 144 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 GOLGA6L19H0YKK7 550 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 SLC7A4O43246 635 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 TPM2P07951 284 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 MYF5P13349 255 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 E2F1Q01094 437 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 SLC12A1Q13621 1099 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 STILQ15468 1287 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 TAF5Q15542 800 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 CDCP2Q5VXM1 449 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 DENND1BQ6P3S1 775 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 BEND5Q7L4P6 421 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 ARHGEF19Q8IW93 802 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 PPM1KQ8N3J5 372 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 TMEM145Q8NBT3 493 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 KLK6Q92876 244 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 BTN2A3PQ96KV6 586 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 NT5C1BQ96P26 610 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 SLC4A5Q9BY07 1137 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 CBX8Q9HC52 389 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 TJP2Q9UDY2 1190 aa16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.92■□□□□ 0.3
SHKBP1-215ENST00000597649 SPTA1P02549 2419 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 KCNU1A8MYU2 1149 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 PRAMEF26H0Y7S4 382 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 CAPN9O14815 690 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 PMM2O15305 246 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 SLC31A1O15431 190 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 ATP9BO43861 1147 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 MAGEC1O60732 1142 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 TRUB2O95900 331 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 MPOP05164 745 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 EEF1GP26641 437 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 NUDT1P36639 197 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 NNMTP40261 264 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 VASPP50552 380 aaPredicted RBP16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 IRAK1P51617 712 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 MARSP56192 900 aaKnown RBP16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 SULT2A1Q06520 285 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 OR4C6Q8NH72 309 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 KLHDC7BQ96G42 594 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 KREMEN1Q96MU8 473 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 SEMA4CQ9C0C4 833 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 CPNE5Q9HCH3 593 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 ST7Q9NRC1 585 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 KLHL11Q9NVR0 708 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 OR51B4Q9Y5P0 310 aa16.91■□□□□ 0.3
SHKBP1-215ENST00000597649 LY6G6EA0A0G2JKS1 128 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 A0A1B0GVM2 712 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 F5H5T6 163 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 RNF103O00237 685 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 MCF2LO15068 1137 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 OPA1O60313 960 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 APOEP02649 317 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 THEGLP0DJG4 465 aa16.9■□□□□ 0.3
SHKBP1-215ENST00000597649 PRLRP16471 622 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms