RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 SPATA2LQ8IUW3 424 aaPredicted RBP23.13■■□□□ 1.29
SRRM1-222ENST00000596378 GIMAP7Q8NHV1 300 aa23.13■■□□□ 1.29
SRRM1-222ENST00000596378 ZNF570Q96NI8 536 aa23.13■■□□□ 1.29
SRRM1-222ENST00000596378 CCDC106Q9BWC9 280 aa23.13■■□□□ 1.29
SRRM1-222ENST00000596378 OXCT2Q9BYC2 517 aaPredicted RBP23.13■■□□□ 1.29
SRRM1-222ENST00000596378 NMUR1Q9HB89 426 aa23.13■■□□□ 1.29
SRRM1-222ENST00000596378 SOX13Q9UN79 622 aa23.13■■□□□ 1.29
SRRM1-222ENST00000596378 PATJQ8NI35 1801 aa23.13■■□□□ 1.29
SRRM1-222ENST00000596378 A0A096LPK6 155 aa23.13■■□□□ 1.29
SRRM1-222ENST00000596378 GNAZP19086 355 aa23.13■■□□□ 1.29
SRRM1-222ENST00000596378 KPNB1Q14974 876 aaKnown RBP23.13■■□□□ 1.29
SRRM1-222ENST00000596378 SCD5Q86SK9 330 aa23.13■■□□□ 1.29
SRRM1-222ENST00000596378 THEM5Q8N1Q8 247 aa23.13■■□□□ 1.29
SRRM1-222ENST00000596378 ATPAF2Q8N5M1 289 aa23.13■■□□□ 1.29
SRRM1-222ENST00000596378 N4BP2L2Q92802 583 aaPredicted RBP23.13■■□□□ 1.29
SRRM1-222ENST00000596378 IL22Q9GZX6 179 aa23.13■■□□□ 1.29
SRRM1-222ENST00000596378 DSEQ9UL01 958 aa23.13■■□□□ 1.29
SRRM1-222ENST00000596378 MYO16Q9Y6X6 1858 aa23.12■■□□□ 1.29
SRRM1-222ENST00000596378 RALBP11234 206 aa23.12■■□□□ 1.29
SRRM1-222ENST00000596378 NPY2RP49146 381 aa23.12■■□□□ 1.29
SRRM1-222ENST00000596378 FCGRTP55899 365 aa23.12■■□□□ 1.29
SRRM1-222ENST00000596378 CDH17Q12864 832 aa23.12■■□□□ 1.29
SRRM1-222ENST00000596378 MPP3Q13368 585 aa23.12■■□□□ 1.29
SRRM1-222ENST00000596378 TUBB3Q13509 450 aa23.12■■□□□ 1.29
SRRM1-222ENST00000596378 INSCQ1MX18 579 aa23.12■■□□□ 1.29
SRRM1-222ENST00000596378 WDR75Q8IWA0 830 aaKnown RBP23.12■■□□□ 1.29
SRRM1-222ENST00000596378 SCN4BQ8IWT1 228 aa23.12■■□□□ 1.29
SRRM1-222ENST00000596378 WDR60Q8WVS4 1066 aa23.12■■□□□ 1.29
SRRM1-222ENST00000596378 ISL2Q96A47 359 aa23.12■■□□□ 1.29
SRRM1-222ENST00000596378 SUSD3Q96L08 255 aa23.12■■□□□ 1.29
SRRM1-222ENST00000596378 FCRL2Q96LA5 508 aaPredicted RBP23.12■■□□□ 1.29
SRRM1-222ENST00000596378 SLC39A8Q9C0K1 460 aa23.12■■□□□ 1.29
SRRM1-222ENST00000596378 ADAM28Q9UKQ2 775 aa23.12■■□□□ 1.29
SRRM1-222ENST00000596378 FAM155AB1AL88 458 aaPredicted RBP23.11■■□□□ 1.29
SRRM1-222ENST00000596378 TNFRSF10BO14763 440 aa23.11■■□□□ 1.29
SRRM1-222ENST00000596378 CPA3P15088 417 aa23.11■■□□□ 1.29
SRRM1-222ENST00000596378 ZNF135P52742 658 aaPredicted RBP23.11■■□□□ 1.29
SRRM1-222ENST00000596378 PRPSAP1Q14558 356 aa23.11■■□□□ 1.29
SRRM1-222ENST00000596378 DBN1Q16643 649 aa23.11■■□□□ 1.29
SRRM1-222ENST00000596378 VWA5B1Q5TIE3 1220 aa23.11■■□□□ 1.29
SRRM1-222ENST00000596378 ZNF280BQ86YH2 543 aa23.11■■□□□ 1.29
SRRM1-222ENST00000596378 RBM15BQ8NDT2 890 aaKnown RBP23.11■■□□□ 1.29
SRRM1-222ENST00000596378 IPMKQ8NFU5 416 aa23.11■■□□□ 1.29
SRRM1-222ENST00000596378 NOD1Q9Y239 953 aa23.11■■□□□ 1.29
SRRM1-222ENST00000596378 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.11■■□□□ 1.29
SRRM1-222ENST00000596378 NYNRINQ9P2P1 1898 aaKnown RBP23.11■■□□□ 1.29
SRRM1-222ENST00000596378 MYLKQ15746 1914 aa23.11■■□□□ 1.29
SRRM1-222ENST00000596378 ZNF189O75820 626 aaPredicted RBP23.11■■□□□ 1.29
SRRM1-222ENST00000596378 SAT1P21673 171 aa23.11■■□□□ 1.29
SRRM1-222ENST00000596378 CDK18Q07002 472 aa23.11■■□□□ 1.29
SRRM1-222ENST00000596378 SLC39A12Q504Y0 691 aa23.11■■□□□ 1.29
SRRM1-222ENST00000596378 ARTNQ5T4W7 220 aa23.11■■□□□ 1.29
SRRM1-222ENST00000596378 NAPEPLDQ6IQ20 393 aa23.11■■□□□ 1.29
SRRM1-222ENST00000596378 SCML4Q8N228 414 aa23.11■■□□□ 1.29
SRRM1-222ENST00000596378 URGCPQ8TCY9 931 aa23.11■■□□□ 1.29
SRRM1-222ENST00000596378 VPS39Q96JC1 886 aa23.11■■□□□ 1.29
SRRM1-222ENST00000596378 ACSS2Q9NR19 701 aa23.11■■□□□ 1.29
SRRM1-222ENST00000596378 ABCC13Q9NSE7 274 aa23.11■■□□□ 1.29
SRRM1-222ENST00000596378 MPP6Q9NZW5 540 aa23.11■■□□□ 1.29
SRRM1-222ENST00000596378 SERPINA6P08185 405 aa23.1■■□□□ 1.29
SRRM1-222ENST00000596378 ELNP15502 786 aa23.1■■□□□ 1.29
SRRM1-222ENST00000596378 YWHAHQ04917 246 aaPredicted RBP23.1■■□□□ 1.29
SRRM1-222ENST00000596378 POU6F1Q14863 301 aa23.1■■□□□ 1.29
SRRM1-222ENST00000596378 KDELC2Q7Z4H8 507 aa23.1■■□□□ 1.29
SRRM1-222ENST00000596378 MOCOSQ96EN8 888 aa23.1■■□□□ 1.29
SRRM1-222ENST00000596378 OSER1Q9NX31 292 aa23.1■■□□□ 1.29
SRRM1-222ENST00000596378 ABI2Q9NYB9 513 aaPredicted RBP23.1■■□□□ 1.29
SRRM1-222ENST00000596378 A0A1W2PQH9 124 aa23.1■■□□□ 1.29
SRRM1-222ENST00000596378 MAFKO60675 156 aa23.1■■□□□ 1.29
SRRM1-222ENST00000596378 C2P06681 752 aa23.1■■□□□ 1.29
SRRM1-222ENST00000596378 PGM1P36871 562 aa23.1■■□□□ 1.29
SRRM1-222ENST00000596378 GPR15P49685 360 aa23.1■■□□□ 1.29
SRRM1-222ENST00000596378 INHBEP58166 350 aa23.1■■□□□ 1.29
SRRM1-222ENST00000596378 COG7P83436 770 aa23.1■■□□□ 1.29
SRRM1-222ENST00000596378 ACSBG2Q5FVE4 666 aa23.1■■□□□ 1.29
SRRM1-222ENST00000596378 NAPRTQ6XQN6 538 aa23.1■■□□□ 1.29
SRRM1-222ENST00000596378 C14orf80Q86SX3 495 aa23.1■■□□□ 1.29
SRRM1-222ENST00000596378 ZNF598Q86UK7 904 aaKnown RBP23.1■■□□□ 1.29
SRRM1-222ENST00000596378 ENDOVQ8N8Q3 282 aaKnown RBP23.1■■□□□ 1.29
SRRM1-222ENST00000596378 SMOC2Q9H3U7 446 aa23.1■■□□□ 1.29
SRRM1-222ENST00000596378 CPSF2Q9P2I0 782 aaKnown RBP23.1■■□□□ 1.29
SRRM1-222ENST00000596378 TAGLN3Q9UI15 199 aa23.1■■□□□ 1.29
SRRM1-222ENST00000596378 SLC39A10Q9ULF5 831 aa23.1■■□□□ 1.29
SRRM1-222ENST00000596378 DDHD2O94830 711 aa23.09■■□□□ 1.29
SRRM1-222ENST00000596378 CCNCP24863 283 aa23.09■■□□□ 1.29
SRRM1-222ENST00000596378 CCR1P32246 355 aa23.09■■□□□ 1.29
SRRM1-222ENST00000596378 ABCE1P61221 599 aaKnown RBP23.09■■□□□ 1.29
SRRM1-222ENST00000596378 GRM3Q14832 879 aa23.09■■□□□ 1.29
SRRM1-222ENST00000596378 TSGA13Q96PP4 275 aa23.09■■□□□ 1.29
SRRM1-222ENST00000596378 MCMBPQ9BTE3 642 aa23.09■■□□□ 1.29
SRRM1-222ENST00000596378 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.09■■□□□ 1.29
SRRM1-222ENST00000596378 MAGEB16A2A368 324 aa23.09■■□□□ 1.29
SRRM1-222ENST00000596378 MEI4A8MW99 385 aa23.09■■□□□ 1.29
SRRM1-222ENST00000596378 ELF1P32519 619 aa23.09■■□□□ 1.29
SRRM1-222ENST00000596378 FRG1Q14331 258 aaKnown RBP23.09■■□□□ 1.29
SRRM1-222ENST00000596378 MAPRE1Q15691 268 aaKnown RBP23.09■■□□□ 1.29
SRRM1-222ENST00000596378 CCDC153Q494R4 210 aa23.09■■□□□ 1.29
SRRM1-222ENST00000596378 MANEALQ5VSG8 457 aa23.09■■□□□ 1.29
SRRM1-222ENST00000596378 CCSAPQ6IQ19 270 aaPredicted RBP23.09■■□□□ 1.29
SRRM1-222ENST00000596378 CLEC14AQ86T13 490 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms