RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 GBE1Q04446 702 aa10.82□□□□□ -0.68
LIG1-210ENST00000596332 EIF4HQ15056 248 aaKnown RBP10.82□□□□□ -0.68
LIG1-210ENST00000596332 LLGL1Q15334 1064 aa10.82□□□□□ -0.68
LIG1-210ENST00000596332 C6orf118Q5T5N4 469 aa10.82□□□□□ -0.68
LIG1-210ENST00000596332 NPNTQ6UXI9 565 aa10.82□□□□□ -0.68
LIG1-210ENST00000596332 RCOR2Q8IZ40 523 aa10.82□□□□□ -0.68
LIG1-210ENST00000596332 SPEM1Q8N4L4 309 aa10.82□□□□□ -0.68
LIG1-210ENST00000596332 CCDC33Q8N5R6 958 aa10.82□□□□□ -0.68
LIG1-210ENST00000596332 ZNF513Q8N8E2 541 aaPredicted RBP10.82□□□□□ -0.68
LIG1-210ENST00000596332 ZNF557Q8N988 423 aaPredicted RBP10.82□□□□□ -0.68
LIG1-210ENST00000596332 DCAF4L2Q8NA75 395 aa10.82□□□□□ -0.68
LIG1-210ENST00000596332 KDM1BQ8NB78 822 aa10.82□□□□□ -0.68
LIG1-210ENST00000596332 TXNDC5Q8NBS9 432 aaKnown RBP10.82□□□□□ -0.68
LIG1-210ENST00000596332 LRRN4Q8WUT4 740 aa10.82□□□□□ -0.68
LIG1-210ENST00000596332 NELL1Q92832 810 aa10.82□□□□□ -0.68
LIG1-210ENST00000596332 PTPRN2Q92932 1015 aa10.82□□□□□ -0.68
LIG1-210ENST00000596332 CATSPERBQ9H7T0 1116 aa10.82□□□□□ -0.68
LIG1-210ENST00000596332 CACNA2D2Q9NY47 1150 aa10.82□□□□□ -0.68
LIG1-210ENST00000596332 DDX56Q9NY93 547 aaKnown RBP10.82□□□□□ -0.68
LIG1-210ENST00000596332 DTLQ9NZJ0 730 aa10.82□□□□□ -0.68
LIG1-210ENST00000596332 SAE1Q9UBE0 346 aaPredicted RBP10.82□□□□□ -0.68
LIG1-210ENST00000596332 AMFRQ9UKV5 643 aa10.82□□□□□ -0.68
LIG1-210ENST00000596332 MMP17Q9ULZ9 603 aa10.82□□□□□ -0.68
LIG1-210ENST00000596332 HS3ST2Q9Y278 367 aa10.82□□□□□ -0.68
LIG1-210ENST00000596332 STON1Q9Y6Q2 735 aa10.82□□□□□ -0.68
LIG1-210ENST00000596332 KMT2EQ8IZD2 1858 aa10.82□□□□□ -0.68
LIG1-210ENST00000596332 ZNF318Q5VUA4 2279 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 CXorf51AA0A1B0GTR3 108 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 TCRBV7S2A1N4TA0A589 114 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 TYW5A2RUC4 315 aaKnown RBP10.81□□□□□ -0.68
LIG1-210ENST00000596332 STK25O00506 426 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 MFSD11O43934 449 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 MAFKO60675 156 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 RAMP2O60895 175 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 ZRANB2O95218 330 aaKnown RBP eCLIP10.81□□□□□ -0.68
LIG1-210ENST00000596332 PAPSS2O95340 614 aaPredicted RBP10.81□□□□□ -0.68
LIG1-210ENST00000596332 MAP3K6O95382 1288 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 KLF8O95600 359 aaPredicted RBP10.81□□□□□ -0.68
LIG1-210ENST00000596332 KRT1P04264 644 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 HLA-EP13747 358 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 PECAM1P16284 738 aaPredicted RBP10.81□□□□□ -0.68
LIG1-210ENST00000596332 POLR2EP19388 210 aaKnown RBP10.81□□□□□ -0.68
LIG1-210ENST00000596332 ARL4AP40617 200 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 COPAP53621 1224 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 NAP1L1P55209 391 aaKnown RBP10.81□□□□□ -0.68
LIG1-210ENST00000596332 OXCT1P55809 520 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 KLF1Q13351 362 aaPredicted RBP10.81□□□□□ -0.68
LIG1-210ENST00000596332 ZNF211Q13398 564 aaPredicted RBP10.81□□□□□ -0.68
LIG1-210ENST00000596332 LRRC32Q14392 662 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 KRT81Q14533 505 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 IHHQ14623 411 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 POLD3Q15054 466 aaPredicted RBP10.81□□□□□ -0.68
LIG1-210ENST00000596332 CYTH1Q15438 398 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 TMEM31Q5JXX7 168 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 LINGO4Q6UY18 593 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 LEKR1Q6ZMV7 388 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 SYT13Q7L8C5 426 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 PEX26Q7Z412 305 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 TXLNBQ8N3L3 684 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 SH2D3CQ8N5H7 860 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 ZNF366Q8N895 744 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 DTWD2Q8NBA8 298 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 ACDQ96AP0 544 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 OLFM3Q96PB7 478 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 FAM129BQ96TA1 746 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 CALN1Q9BXU9 219 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 CIPCQ9C0C6 399 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 MFSD1Q9H3U5 465 aa10.81□□□□□ -0.68
LIG1-210ENST00000596332 NYNRINQ9P2P1 1898 aaKnown RBP10.81□□□□□ -0.68
LIG1-210ENST00000596332 ATG2BQ96BY7 2078 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 MIF4GDA9UHW6 222 aaKnown RBP10.8□□□□□ -0.68
LIG1-210ENST00000596332 NCAM2O15394 837 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 ZSCAN12O43309 604 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 PRAMEF11O60813 436 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 ASLP04424 464 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 SRPRAP08240 638 aaKnown RBP10.8□□□□□ -0.68
LIG1-210ENST00000596332 NTSR1P30989 418 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 RWDD2BP57060 319 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 DMWDQ09019 674 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 GALNT2Q10471 571 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 CAMK2GQ13555 558 aaPredicted RBP10.8□□□□□ -0.68
LIG1-210ENST00000596332 SIX1Q15475 284 aaPredicted RBP10.8□□□□□ -0.68
LIG1-210ENST00000596332 CRY1Q16526 586 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 PPP2R5EQ16537 467 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 IFI16Q16666 785 aaKnown RBP10.8□□□□□ -0.68
LIG1-210ENST00000596332 HNRNPA1L2Q32P51 320 aaKnown RBP10.8□□□□□ -0.68
LIG1-210ENST00000596332 PARP15Q460N3 678 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 PREPLQ4J6C6 727 aaPredicted RBP10.8□□□□□ -0.68
LIG1-210ENST00000596332 TFDP3Q5H9I0 405 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 C9orf64Q5T6V5 341 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 TMCO3Q6UWJ1 677 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 MAP7D3Q8IWC1 876 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 SYCE1Q8N0S2 351 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 SLC35F6Q8N357 371 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 LZTR1Q8N653 840 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 TRIM58Q8NG06 486 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 TSGA13Q96PP4 275 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 WDR24Q96S15 920 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 SPON2Q9BUD6 331 aa10.8□□□□□ -0.68
LIG1-210ENST00000596332 C1QTNF1Q9BXJ1 281 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms