RNA–Protein interactions for RNA: ENST00000596288.5

MCM3-205, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-205ENST00000596288 TBCCQ15814 346 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 KIZQ2M2Z5 673 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 DCAF4L1Q3SXM0 396 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 SDCCAG8Q86SQ7 713 aaPredicted RBP9.11□□□□□ -0.95
MCM3-205ENST00000596288 FAM131BQ86XD5 332 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 NAT16Q8N8M0 369 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 COLGALT1Q8NBJ5 622 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 GDPD5Q8WTR4 605 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 NAT14Q8WUY8 206 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 NXF3Q9H4D5 531 aaKnown RBP9.11□□□□□ -0.95
MCM3-205ENST00000596288 WDR55Q9H6Y2 383 aaPredicted RBP9.11□□□□□ -0.95
MCM3-205ENST00000596288 TMEM216Q9P0N5 145 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 BLOC1S6Q9UL45 172 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 RNF103O00237 685 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 BEST1O76090 585 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 SNAI1O95863 264 aaPredicted RBP9.11□□□□□ -0.95
MCM3-205ENST00000596288 PGAM1P18669 254 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 FDFT1P37268 417 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 SOX4Q06945 474 aaPredicted RBP9.11□□□□□ -0.95
MCM3-205ENST00000596288 CBX3Q13185 183 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 DPYSQ14117 519 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 HIC1Q14526 733 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 SLC25A52Q3SY17 297 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 DPY19L2Q6NUT2 758 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 PAQR9Q6ZVX9 377 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 C10orf107Q8IVU9 208 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 ANKRD13AQ8IZ07 590 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 ZNF567Q8N184 647 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 OR6B3Q8NGW1 331 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 ZC3H15Q8WU90 426 aaKnown RBP9.11□□□□□ -0.95
MCM3-205ENST00000596288 MRPL1Q9BYD6 325 aaKnown RBP9.11□□□□□ -0.95
MCM3-205ENST00000596288 GCOM2Q9BZD3 368 aaPredicted RBP9.11□□□□□ -0.95
MCM3-205ENST00000596288 GDAP2Q9NXN4 497 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 SORCS3Q9UPU3 1222 aa9.11□□□□□ -0.95
MCM3-205ENST00000596288 DCLK1O15075 740 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 GLRA3O75311 464 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 CSPG5O95196 566 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 CYP2C8P10632 490 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 TSPAN8P19075 237 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 PSMB4P28070 264 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 IREB2P48200 963 aaKnown RBP9.1□□□□□ -0.95
MCM3-205ENST00000596288 SLC1A6P48664 564 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 HARS2P49590 506 aaKnown RBP9.1□□□□□ -0.95
MCM3-205ENST00000596288 NME3Q13232 169 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 ITGA9Q13797 1035 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 TRMT5Q32P41 509 aaKnown RBP9.1□□□□□ -0.95
MCM3-205ENST00000596288 ANKDD1AQ495B1 522 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 FBXO48Q5FWF7 155 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 XKR4Q5GH76 650 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 C6orf52Q5T4I8 152 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 C1QTNF12Q5T7M4 302 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 ITPRIPL1Q6GPH6 555 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 SLC27A1Q6PCB7 646 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 PGM2L1Q6PCE3 622 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 ANKRD23Q86SG2 305 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 AMIGO2Q86SJ2 522 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 DEFB107AQ8IZN7 70 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 SLC2A14Q8TDB8 520 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 USP33Q8TEY7 942 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 DPF3Q92784 378 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 NPY6RQ99463 290 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 FAM49AQ9H0Q0 323 aaPredicted RBP9.1□□□□□ -0.95
MCM3-205ENST00000596288 ATXN3LQ9H3M9 355 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 STN1Q9H668 368 aaKnown RBP9.1□□□□□ -0.95
MCM3-205ENST00000596288 EPS8L2Q9H6S3 715 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.1□□□□□ -0.95
MCM3-205ENST00000596288 KLK14Q9P0G3 267 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 COPG2Q9UBF2 871 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 FNDC3AQ9Y2H6 1198 aaKnown RBP9.1□□□□□ -0.95
MCM3-205ENST00000596288 FNDC1Q4ZHG4 1894 aaPredicted RBP9.1□□□□□ -0.95
MCM3-205ENST00000596288 SIN3BO75182 1162 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 RECQL4O94761 1208 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 FYNP06241 537 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 PMLP29590 882 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 IDH3AP50213 366 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 KPNA1P52294 538 aaPredicted RBP9.1□□□□□ -0.95
MCM3-205ENST00000596288 CD300CQ08708 224 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 R3HDM1Q15032 1099 aaKnown RBP9.1□□□□□ -0.95
MCM3-205ENST00000596288 PAFAH1B3Q15102 231 aaKnown RBP9.1□□□□□ -0.95
MCM3-205ENST00000596288 DNAL1Q4LDG9 190 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 PPM1LQ5SGD2 360 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 TMEM198Q66K66 360 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 PSTKQ8IV42 348 aaKnown RBP9.1□□□□□ -0.95
MCM3-205ENST00000596288 DEFB106AQ8N104 65 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 PLD6Q8N2A8 252 aaKnown RBP9.1□□□□□ -0.95
MCM3-205ENST00000596288 PHTF2Q8N3S3 785 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 TMIGD2Q96BF3 282 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 HSFY1Q96LI6 401 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 SENP6Q9GZR1 1112 aaPredicted RBP9.1□□□□□ -0.95
MCM3-205ENST00000596288 BRD8Q9H0E9 1235 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 VTA1Q9NP79 307 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 ADARB2Q9NS39 739 aaKnown RBP9.1□□□□□ -0.95
MCM3-205ENST00000596288 IGSF9Q9P2J2 1179 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 DNAJB4Q9UDY4 337 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 ZCWPW2A0A1B0GU75 182 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 SPECC1L-ADORA2AF8WAN1 911 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 FAM72CH0Y354 149 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 MMP3P08254 477 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 RAG1P15918 1043 aa9.1□□□□□ -0.95
MCM3-205ENST00000596288 IGFBP6P24592 240 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms