RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 EDDM13A0A1B0GTR0 161 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 BCLAF3A2AJT9 711 aaKnown RBP11.41□□□□□ -0.58
VRK3-210ENST00000596121 TARSL2A2RTX5 802 aaKnown RBP11.41□□□□□ -0.58
VRK3-210ENST00000596121 WASH4PA8MWX3 477 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 CBX4O00257 560 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 MAP3K13O43283 966 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 ZNF217O75362 1048 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 RNF8O76064 485 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 RHOBTB1O94844 696 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 TPM1P09493 284 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 H2AFZP0C0S5 128 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 TMEM253P0C7T8 217 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 GOT1P17174 413 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 MAPKAPK2P49137 400 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 AIF1P55008 147 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 TAS2R40P59535 323 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 SLC25A11Q02978 314 aaKnown RBP11.41□□□□□ -0.58
VRK3-210ENST00000596121 PIGHQ14442 188 aaPredicted RBP11.41□□□□□ -0.58
VRK3-210ENST00000596121 TSR1Q2NL82 804 aaKnown RBP11.41□□□□□ -0.58
VRK3-210ENST00000596121 SMTNL2Q2TAL5 461 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 ATP13A4Q4VNC1 1196 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 PLA2G2CQ5R387 149 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 LEKR1Q6ZMV7 388 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 Q6ZVU0 165 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 H2AFVQ71UI9 128 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 FAM124AQ86V42 546 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 KIAA2013Q8IYS2 634 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 NIPA2Q8N8Q9 360 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 ZNF564Q8TBZ8 553 aaPredicted RBP11.41□□□□□ -0.58
VRK3-210ENST00000596121 TOE1Q96GM8 510 aaKnown RBP11.41□□□□□ -0.58
VRK3-210ENST00000596121 LOXL4Q96JB6 756 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 CCDC42Q96M95 316 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 C2orf49Q9BVC5 232 aaPredicted RBP11.41□□□□□ -0.58
VRK3-210ENST00000596121 DEF6Q9H4E7 631 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 ZWILCHQ9H900 591 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 ATP13A1Q9HD20 1204 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 RXFP3Q9NSD7 469 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 CWC15Q9P013 229 aaKnown RBP11.41□□□□□ -0.58
VRK3-210ENST00000596121 IP6K2Q9UHH9 426 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 GMEB2Q9UKD1 530 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 SARDHQ9UL12 918 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 TFR2Q9UP52 801 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 MFHAS1Q9Y4C4 1052 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 DMXL1Q9Y485 3027 aa11.41□□□□□ -0.58
VRK3-210ENST00000596121 SPTBN4Q9H254 2564 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 EEF2KO00418 725 aaKnown RBP11.4□□□□□ -0.58
VRK3-210ENST00000596121 PLK4O00444 970 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 MID1O15344 667 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 ZBTB24O43167 697 aaPredicted RBP11.4□□□□□ -0.58
VRK3-210ENST00000596121 PRPSAP2O60256 369 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 CTSLP07711 333 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 RARAP10276 462 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 FECHP22830 423 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 ITPKAP23677 461 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 IL4RP24394 825 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 CD6P30203 668 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 ACSL1P33121 698 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 DHPSP49366 369 aaPredicted RBP11.4□□□□□ -0.58
VRK3-210ENST00000596121 TPI1P60174 286 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 KRT83P78385 493 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 RPL6Q02878 288 aaKnown RBP11.4□□□□□ -0.58
VRK3-210ENST00000596121 CREB5Q02930 508 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 BYSLQ13895 437 aaKnown RBP11.4□□□□□ -0.58
VRK3-210ENST00000596121 ACAP1Q15027 740 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 SF3A2Q15428 464 aaKnown RBP11.4□□□□□ -0.58
VRK3-210ENST00000596121 ELF2Q15723 593 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 ACCSLQ4AC99 568 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 ZNF776Q68DI1 518 aaPredicted RBP11.4□□□□□ -0.58
VRK3-210ENST00000596121 TCEAL6Q6IPX3 200 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 MMAAQ8IVH4 418 aaKnown RBP11.4□□□□□ -0.58
VRK3-210ENST00000596121 TP53INP2Q8IXH6 220 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 UMODL1-AS1Q8N2C9 162 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 AADATQ8N5Z0 425 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 ATP11CQ8NB49 1132 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 CHST14Q8NCH0 376 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 OR2A12Q8NGT7 310 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 SLC35G2Q8TBE7 412 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 TCEAL3Q969E4 200 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 HMCESQ96FZ2 354 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 SPACA7Q96KW9 195 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 PPP1R9BQ96SB3 815 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 EPAS1Q99814 870 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 HINFPQ9BQA5 517 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 MAGEH1Q9H213 219 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 TNKS2Q9H2K2 1166 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 PABPC3Q9H361 631 aaKnown RBP11.4□□□□□ -0.58
VRK3-210ENST00000596121 RETREG1Q9H6L5 497 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 SEMA4GQ9NTN9 838 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 CTTNBP2NLQ9P2B4 639 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 SLC25A13Q9UJS0 675 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 PPM1HQ9ULR3 514 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 FCF1Q9Y324 198 aaKnown RBP11.4□□□□□ -0.58
VRK3-210ENST00000596121 SLCO1B1Q9Y6L6 691 aa11.4□□□□□ -0.58
VRK3-210ENST00000596121 PATE3B3GLJ2 98 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 C10orf142B7Z368 130 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 RASA4BC9J798 803 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 MYO1FO00160 1098 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 RASA4O43374 803 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 KDELR3O43731 214 aa11.39□□□□□ -0.59
VRK3-210ENST00000596121 RAMP2O60895 175 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms