RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.73■□□□□ 0.11
USE1-206ENST00000595101 RCCD1A6NED2 376 aa15.73■□□□□ 0.11
USE1-206ENST00000595101 EEF2KO00418 725 aaKnown RBP15.73■□□□□ 0.11
USE1-206ENST00000595101 BNIP3LO60238 219 aa15.73■□□□□ 0.11
USE1-206ENST00000595101 CD48P09326 243 aa15.73■□□□□ 0.11
USE1-206ENST00000595101 CDC25BP30305 580 aa15.73■□□□□ 0.11
USE1-206ENST00000595101 GJC1P36383 396 aa15.73■□□□□ 0.11
USE1-206ENST00000595101 SSR1P43307 286 aaKnown RBP15.73■□□□□ 0.11
USE1-206ENST00000595101 MAPKAPK2P49137 400 aa15.73■□□□□ 0.11
USE1-206ENST00000595101 TPMTP51580 245 aa15.73■□□□□ 0.11
USE1-206ENST00000595101 RPS14P62263 151 aaKnown RBP15.73■□□□□ 0.11
USE1-206ENST00000595101 MESDQ14696 234 aa15.73■□□□□ 0.11
USE1-206ENST00000595101 IL31Q6EBC2 164 aa15.73■□□□□ 0.11
USE1-206ENST00000595101 RFX8Q6ZV50 586 aa15.73■□□□□ 0.11
USE1-206ENST00000595101 Q6ZVU0 165 aa15.73■□□□□ 0.11
USE1-206ENST00000595101 TMEFF1Q8IYR6 380 aa15.73■□□□□ 0.11
USE1-206ENST00000595101 SH2D3CQ8N5H7 860 aa15.73■□□□□ 0.11
USE1-206ENST00000595101 ATP11CQ8NB49 1132 aa15.73■□□□□ 0.11
USE1-206ENST00000595101 KDM1BQ8NB78 822 aa15.73■□□□□ 0.11
USE1-206ENST00000595101 PRCCQ92733 491 aaPredicted RBP15.73■□□□□ 0.11
USE1-206ENST00000595101 CELF6Q96J87 481 aaKnown RBP15.73■□□□□ 0.11
USE1-206ENST00000595101 C2orf49Q9BVC5 232 aaPredicted RBP15.73■□□□□ 0.11
USE1-206ENST00000595101 ACE2Q9BYF1 805 aaPredicted RBP15.73■□□□□ 0.11
USE1-206ENST00000595101 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.73■□□□□ 0.11
USE1-206ENST00000595101 ETNK2Q9NVF9 386 aa15.73■□□□□ 0.11
USE1-206ENST00000595101 HYOU1Q9Y4L1 999 aa15.73■□□□□ 0.11
USE1-206ENST00000595101 PTPRZ1P23471 2315 aaPredicted RBP15.73■□□□□ 0.11
USE1-206ENST00000595101 DMXL1Q9Y485 3027 aa15.73■□□□□ 0.11
USE1-206ENST00000595101 ATP9BO43861 1147 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 RAMP2O60895 175 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 ZNF821O75541 412 aaPredicted RBP15.72■□□□□ 0.11
USE1-206ENST00000595101 PROSCO94903 275 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 LCA5LO95447 670 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 ERCC2P18074 760 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 PTGER3P43115 390 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 MAGEA1P43355 309 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 POLD3Q15054 466 aaPredicted RBP15.72■□□□□ 0.11
USE1-206ENST00000595101 ARMCX6Q7L4S7 300 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 FAM124AQ86V42 546 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 MMAAQ8IVH4 418 aaKnown RBP15.72■□□□□ 0.11
USE1-206ENST00000595101 HMCESQ96FZ2 354 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 TNKS2Q9H2K2 1166 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 SMOC1Q9H4F8 434 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 ITM2CQ9NQX7 267 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 KLHL11Q9NVR0 708 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 USP36Q9P275 1121 aaKnown RBP15.72■□□□□ 0.11
USE1-206ENST00000595101 SERGEFQ9UGK8 458 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 SLC25A13Q9UJS0 675 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 SARDHQ9UL12 918 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 HS3ST2Q9Y278 367 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 REXO2Q9Y3B8 237 aaKnown RBP15.72■□□□□ 0.11
USE1-206ENST00000595101 PCDHA13Q9Y5I0 950 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 DOCK4Q8N1I0 1966 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 EDDM13A0A1B0GTR0 161 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 WASH4PA8MWX3 477 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 ZBTB24O43167 697 aaPredicted RBP15.72■□□□□ 0.11
USE1-206ENST00000595101 HOXD11P31277 338 aaPredicted RBP15.72■□□□□ 0.11
USE1-206ENST00000595101 KRT83P78385 493 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 MMRN1Q13201 1228 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 DPYSL2Q16555 572 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 BOLA3Q53S33 107 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 POLNQ7Z5Q5 900 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.72■□□□□ 0.11
USE1-206ENST00000595101 CCDC170Q8IYT3 715 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 NPWQ8N729 165 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 ACRBPQ8NEB7 543 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 ZC3H10Q96K80 434 aaKnown RBP15.72■□□□□ 0.11
USE1-206ENST00000595101 PPP1R9BQ96SB3 815 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 RSPH9Q9H1X1 276 aaPredicted RBP15.72■□□□□ 0.11
USE1-206ENST00000595101 GOLPH3Q9H4A6 298 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 SALL4Q9UJQ4 1053 aa15.72■□□□□ 0.11
USE1-206ENST00000595101 FCF1Q9Y324 198 aaKnown RBP15.72■□□□□ 0.11
USE1-206ENST00000595101 EPN1Q9Y6I3 576 aaPredicted RBP15.72■□□□□ 0.11
USE1-206ENST00000595101 CKAP5Q14008 2032 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 A0A0U1RQJ8 604 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 RASA4BC9J798 803 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 RASA4O43374 803 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 NDUFA10O95299 355 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 AMPD1P23109 780 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 IL4RP24394 825 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 NNMTP40261 264 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 DPYSQ14117 519 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 E2F5Q15329 346 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 POM121L1PQ3SYA9 428 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 PMS2CLQ68D20 193 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 ZNF783Q6ZMS7 281 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 RFFLQ8WZ73 363 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 TOE1Q96GM8 510 aaKnown RBP15.71■□□□□ 0.11
USE1-206ENST00000595101 HINFPQ9BQA5 517 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 SLC39A8Q9C0K1 460 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 MAGEH1Q9H213 219 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 CATSPERBQ9H7T0 1116 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 PCDH18Q9HCL0 1135 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 PARD6AQ9NPB6 346 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 RAB23Q9ULC3 237 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 DUSP10Q9Y6W6 482 aa15.71■□□□□ 0.11
USE1-206ENST00000595101 TARSL2A2RTX5 802 aaKnown RBP15.7■□□□□ 0.1
USE1-206ENST00000595101 PLK4O00444 970 aa15.7■□□□□ 0.1
USE1-206ENST00000595101 MID1O15344 667 aa15.7■□□□□ 0.1
USE1-206ENST00000595101 MAP3K13O43283 966 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms