RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 CDX4O14627 284 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 BCAT2O15382 392 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 SLC7A4O43246 635 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 RNASEH2AO75792 299 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 RHOQP17081 205 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 ACSL1P33121 698 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 PSMD8P48556 350 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 GEMIN4P57678 1058 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 SLC20A2Q08357 652 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 CCDC15Q0P6D6 951 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 EFHC2Q5JST6 749 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 PPP1R15BQ5SWA1 713 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 MANEALQ5VSG8 457 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 IL27RAQ6UWB1 636 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 SLFN11Q7Z7L1 901 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 PHLDB2Q86SQ0 1253 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 STK40Q8N2I9 435 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 OR52K2Q8NGK3 314 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 FRS2Q8WU20 508 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 SYN2Q92777 582 aaPredicted RBP18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 TBC1D31Q96DN5 1066 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 CNTNAP3BQ96NU0 1288 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 CNTNAP3Q9BZ76 1288 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 MIR1-1HGQ9H1L0 117 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 HAUS4Q9H6D7 363 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 MPP6Q9NZW5 540 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 VPS51Q9UID3 782 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 MAP1BP46821 2468 aaKnown RBP18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 PCDH15Q96QU1 1955 aa18.18■□□□□ 0.5
SHKBP1-204ENST00000594862 PI4KAP42356 2102 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 EIF3CLB5ME19 914 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 MCF2LO15068 1137 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 MID1O15344 667 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 IL1BP01584 269 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 MYBL1P10243 752 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 GOT1P17174 413 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 CSRP1P21291 193 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 RRM1P23921 792 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 HTR7P34969 479 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 MAPK8P45983 427 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 AFF3P51826 1226 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 GNA12Q03113 381 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 TEAD4Q15561 434 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 DLG2Q15700 870 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 RWDD4Q6NW29 188 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 ZCCHC9Q8N567 271 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 ATP11CQ8NB49 1132 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 OR2T34Q8NGX1 318 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 SNX19Q92543 992 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 FAM129BQ96TA1 746 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 PSMB7Q99436 277 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 EIF3CQ99613 913 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 NCAPGQ9BPX3 1015 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 GTPBP2Q9BX10 602 aaKnown RBP18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 CEP44Q9C0F1 390 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 KDM4CQ9H3R0 1056 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 C6orf106Q9H6K1 298 aaPredicted RBP18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 ATP13A1Q9HD20 1204 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 TMPRSS4Q9NRS4 437 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 DONSONQ9NYP3 566 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 ZNF212Q9UDV6 495 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 SNX10Q9Y5X0 201 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 SCINQ9Y6U3 715 aa18.17■□□□□ 0.5
SHKBP1-204ENST00000594862 A0A1W2PP55 124 aa18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 UPK3BL1B0FP48 263 aa18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 UPK3BL2E5RIL1 263 aa18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 CCP110O43303 1012 aa18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 OPHN1O60890 802 aa18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 GJB6O95452 261 aa18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 PLEKP08567 350 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 SRCP12931 536 aa18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 CD27P26842 260 aa18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 L1CAMP32004 1257 aa18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 RECQLP46063 649 aaPredicted RBP18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 SLC14A1Q13336 389 aa18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 SH3PXD2AQ5TCZ1 1133 aa18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 KIAA0895LQ68EN5 471 aa18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 PLEKHA7Q6IQ23 1121 aa18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 MINDY1Q8N5J2 469 aa18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 EPAS1Q99814 870 aa18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 SLC32A1Q9H598 525 aa18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 MRPL47Q9HD33 250 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 TMEM248Q9NWD8 314 aa18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 EIF2B4Q9UI10 523 aaKnown RBP18.16■□□□□ 0.5
SHKBP1-204ENST00000594862 CBX4O00257 560 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 RTN2O75298 545 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 LRIG2O94898 1065 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 FSBPO95073 299 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 CER1O95813 267 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 ADRB1P08588 477 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 MAOBP27338 520 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 NUDT1P36639 197 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 PBX1P40424 430 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 CCR5P51681 352 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 ZBED6P86452 979 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 UAP1L1Q3KQV9 507 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 TDRD12Q587J7 1177 aaKnown RBP18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 Q6ZVU0 165 aa18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 ZNF571Q7Z3V5 609 aaPredicted RBP18.15■□□□□ 0.5
SHKBP1-204ENST00000594862 TMC6Q7Z403 805 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms