RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 KRT38O76015 456 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 ANXA9O76027 345 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 ALDH1A2O94788 518 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 ZWINTO95229 277 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 HLA-DQB2P05538 268 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 SNRPAP09012 282 aaKnown RBP12.18□□□□□ -0.46
NPC1-214ENST00000593280 TACR2P21452 398 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 DNAJB2P25686 324 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 ELF1P32519 619 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 RPA3P35244 121 aaPredicted RBP12.18□□□□□ -0.46
NPC1-214ENST00000593280 MAPKAPK2P49137 400 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 RGS19P49795 217 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 KCNQ1P51787 676 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 CREMQ03060 361 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 NAB1Q13506 487 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 QPCTQ16769 361 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 SPANXN3Q5MJ09 141 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 NADSYN1Q6IA69 706 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 OTOP2Q7RTS6 562 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 KLHDC8BQ8IXV7 354 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 LRRC34Q8IZ02 419 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 AUTS2Q8WXX7 1259 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 CDKL2Q92772 493 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 FATE1Q969F0 183 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 TTC17Q96AE7 1141 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 PLD4Q96BZ4 506 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 HMCESQ96FZ2 354 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 MYRFLQ96LU7 910 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 MAGEB18Q96M61 343 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 PAIP2Q9BPZ3 127 aaKnown RBP12.18□□□□□ -0.46
NPC1-214ENST00000593280 MCOLN1Q9GZU1 580 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 SP110Q9HB58 689 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.18□□□□□ -0.46
NPC1-214ENST00000593280 RBM22Q9NW64 420 aaKnown RBP eCLIP12.18□□□□□ -0.46
NPC1-214ENST00000593280 UBP1Q9NZI7 540 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 STK39Q9UEW8 545 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 PCDHB12Q9Y5F1 795 aa12.18□□□□□ -0.46
NPC1-214ENST00000593280 GOLGA6L7A0A1B0GV03 622 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 ZBBXA8MT70 800 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 TCP11X1B4DZS4 312 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 TRIM49D1C9J1S8 452 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 COCHO43405 550 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 ACSL4O60488 711 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 RAMP2O60895 175 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 GJB5O95377 273 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 NPY2RP49146 381 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 SLC11A2P49281 568 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 HARS2P49590 506 aaKnown RBP12.17□□□□□ -0.46
NPC1-214ENST00000593280 SERPINB9P50453 376 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 GEMP55040 296 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 NIPAL4Q0D2K0 466 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 TWF1Q12792 350 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 CDH17Q12864 832 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 SEPT7Q16181 437 aaKnown RBP12.17□□□□□ -0.46
NPC1-214ENST00000593280 PARP15Q460N3 678 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 GKAP1Q5VSY0 366 aaPredicted RBP12.17□□□□□ -0.46
NPC1-214ENST00000593280 MARK2Q7KZI7 788 aaKnown RBP12.17□□□□□ -0.46
NPC1-214ENST00000593280 RASSF3Q86WH2 238 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 CIR1Q86X95 450 aaPredicted RBP12.17□□□□□ -0.46
NPC1-214ENST00000593280 SPATS2Q86XZ4 545 aaKnown RBP12.17□□□□□ -0.46
NPC1-214ENST00000593280 ZNF354CQ86Y25 554 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 TCEAL8Q8IYN2 117 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 LGI2Q8N0V4 545 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.17□□□□□ -0.46
NPC1-214ENST00000593280 DENND1AQ8TEH3 1009 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 MTBPQ96DY7 904 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 ZNF419Q96HQ0 510 aaPredicted RBP12.17□□□□□ -0.46
NPC1-214ENST00000593280 APOPT1Q96IL0 206 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 TGS1Q96RS0 853 aaKnown RBP12.17□□□□□ -0.46
NPC1-214ENST00000593280 TBL1YQ9BQ87 522 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 ZNF212Q9UDV6 495 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 MAFFQ9ULX9 164 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 RPS6KL1Q9Y6S9 549 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 ANAPC1Q9H1A4 1944 aa12.17□□□□□ -0.46
NPC1-214ENST00000593280 OBSL1O75147 1896 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 GOLGA8RI6L899 631 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 TM9SF1O15321 606 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 UGT1A9O60656 530 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 ASMTLO95671 621 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 CNTFP26441 200 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 OR1E1P30953 314 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 PPP3CCP48454 512 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 RENBPP51606 427 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 EPHB3P54753 998 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 WDR4P57081 412 aaKnown RBP12.16□□□□□ -0.46
NPC1-214ENST00000593280 MGAT5Q09328 741 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 POLD3Q15054 466 aaPredicted RBP12.16□□□□□ -0.46
NPC1-214ENST00000593280 HHATQ5VTY9 493 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 ZNF449Q6P9G9 518 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 MICALCLQ6ZW33 695 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 GPR65Q8IYL9 337 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 UNC5BQ8IZJ1 945 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 BANPQ8N9N5 519 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 IPMKQ8NFU5 416 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 SPATA22Q8NHS9 363 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 NSMCE1Q8WV22 266 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 ZNF669Q96BR6 464 aaPredicted RBP12.16□□□□□ -0.46
NPC1-214ENST00000593280 SERAC1Q96JX3 654 aa12.16□□□□□ -0.46
NPC1-214ENST00000593280 KLF6Q99612 283 aaPredicted RBP12.16□□□□□ -0.46
NPC1-214ENST00000593280 APOL2Q9BQE5 337 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms