RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 CCDC166P0CW27 439 aa11.14□□□□□ -0.63
LINC01140-210ENST00000590653 PPARGP37231 505 aaPredicted RBP11.14□□□□□ -0.63
LINC01140-210ENST00000590653 MAGEA6P43360 314 aa11.14□□□□□ -0.63
LINC01140-210ENST00000590653 NME5P56597 212 aa11.14□□□□□ -0.63
LINC01140-210ENST00000590653 NAA20P61599 178 aa11.14□□□□□ -0.63
LINC01140-210ENST00000590653 PLOD1Q02809 727 aaPredicted RBP11.14□□□□□ -0.63
LINC01140-210ENST00000590653 NME3Q13232 169 aa11.14□□□□□ -0.63
LINC01140-210ENST00000590653 USP10Q14694 798 aaKnown RBP11.14□□□□□ -0.63
LINC01140-210ENST00000590653 CCDC153Q494R4 210 aa11.14□□□□□ -0.63
LINC01140-210ENST00000590653 NCBP2-AS2Q69YL0 99 aa11.14□□□□□ -0.63
LINC01140-210ENST00000590653 ZFP1Q6P2D0 407 aa11.14□□□□□ -0.63
LINC01140-210ENST00000590653 OLFML1Q6UWY5 402 aa11.14□□□□□ -0.63
LINC01140-210ENST00000590653 FAM47BQ8NA70 645 aa11.14□□□□□ -0.63
LINC01140-210ENST00000590653 RP9Q8TA86 221 aaKnown RBP11.14□□□□□ -0.63
LINC01140-210ENST00000590653 TEX13BQ9BXU2 312 aa11.14□□□□□ -0.63
LINC01140-210ENST00000590653 NIFKQ9BYG3 293 aaKnown RBP11.14□□□□□ -0.63
LINC01140-210ENST00000590653 CYP4F12Q9HCS2 524 aa11.14□□□□□ -0.63
LINC01140-210ENST00000590653 CHRAC1Q9NRG0 131 aa11.14□□□□□ -0.63
LINC01140-210ENST00000590653 AURKCQ9UQB9 309 aa11.14□□□□□ -0.63
LINC01140-210ENST00000590653 FAM149AA5PLN7 773 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 MATN2O00339 956 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 CLIC3O95833 236 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 PITX1P78337 314 aaPredicted RBP11.13□□□□□ -0.63
LINC01140-210ENST00000590653 SOWAHAQ2M3V2 549 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 HSDL1Q3SXM5 330 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 IER5Q5VY09 327 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 FAM160B1Q5W0V3 765 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 LRRC8EQ6NSJ5 796 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 KDELC2Q7Z4H8 507 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 RNF169Q8NCN4 708 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 FAM110BQ8TC76 370 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 KHSRPQ92945 711 aaKnown RBP eCLIP11.13□□□□□ -0.63
LINC01140-210ENST00000590653 QKIQ96PU8 341 aaKnown RBP eCLIP11.13□□□□□ -0.63
LINC01140-210ENST00000590653 TBCBQ99426 244 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 MRPL45Q9BRJ2 306 aaKnown RBP11.13□□□□□ -0.63
LINC01140-210ENST00000590653 HAUS8Q9BT25 410 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 PAIP1Q9H074 479 aaKnown RBP11.13□□□□□ -0.63
LINC01140-210ENST00000590653 VPS33BQ9H267 617 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 TIMMDC1Q9NPL8 285 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 EBF1Q9UH73 591 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 SFMBT1Q9UHJ3 866 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 ZNF510Q9Y2H8 683 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 E7ENX8 843 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 ACKR2O00590 384 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 AKAP10O43572 662 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 ALDH1A2O94788 518 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 UGT1A6P19224 532 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 BACE1P56817 501 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 MPP3Q13368 585 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 EFCAB12Q6NXP0 572 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 POTEHQ6S545 545 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 ZBTB49Q6ZSB9 765 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 ZNF567Q8N184 647 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.13□□□□□ -0.63
LINC01140-210ENST00000590653 GIPC3Q8TF64 312 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 RMND5BQ96G75 393 aaPredicted RBP11.13□□□□□ -0.63
LINC01140-210ENST00000590653 RBBP8Q99708 897 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 CPNE1Q99829 537 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 TRPC7Q9HCX4 862 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 CLEC11AQ9Y240 323 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 COPG1Q9Y678 874 aaKnown RBP11.13□□□□□ -0.63
LINC01140-210ENST00000590653 LRRC37AA6NMS7 1700 aa11.13□□□□□ -0.63
LINC01140-210ENST00000590653 NEMP2A6NFY4 417 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 ZNF839A8K0R7 811 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 PPEF2O14830 753 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 GABBR2O75899 941 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 FARP2O94887 1054 aaPredicted RBP11.12□□□□□ -0.63
LINC01140-210ENST00000590653 CCDC130P13994 396 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 ALOX15P16050 662 aaPredicted RBP11.12□□□□□ -0.63
LINC01140-210ENST00000590653 PLK1P53350 603 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 PSME3P61289 254 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 POU5F1BQ06416 359 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 TARBP2Q15633 366 aaKnown RBP11.12□□□□□ -0.63
LINC01140-210ENST00000590653 SLC44A4Q53GD3 710 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 STXBP5Q5T5C0 1151 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 GRTP1Q5TC63 336 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 LCLAT1Q6UWP7 414 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 SAMD7Q7Z3H4 446 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 ZNF554Q86TJ5 538 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 FAM83AQ86UY5 434 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 PGAM4Q8N0Y7 254 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 PNPLA1Q8N8W4 532 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 LPGAT1Q92604 370 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 GMLQ99445 158 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 CXCL16Q9H2A7 254 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 BFARQ9NZS9 450 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 MORF4L1Q9UBU8 362 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 MYRFQ9Y2G1 1151 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 ANKRD31Q8N7Z5 1873 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 C9JVG2 144 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 GRID2O43424 1007 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 H6PDO95479 791 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 ZNF26P17031 533 aaPredicted RBP11.12□□□□□ -0.63
LINC01140-210ENST00000590653 TSPAN8P19075 237 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 CBX3Q13185 183 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 APOFQ13790 326 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 MXD4Q14582 209 aaPredicted RBP11.12□□□□□ -0.63
LINC01140-210ENST00000590653 GRM3Q14832 879 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 TMEM132DQ14C87 1099 aa11.12□□□□□ -0.63
LINC01140-210ENST00000590653 INSCQ1MX18 579 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms