RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 ZNF557Q8N988 423 aaPredicted RBP13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 CCDC150Q8NCX0 1101 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 INTS4Q96HW7 963 aaKnown RBP13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 IRX2Q9BZI1 471 aaPredicted RBP13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 MIS12Q9H081 205 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 KDM4CQ9H3R0 1056 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 STARD5Q9NSY2 213 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 DNAJC28Q9NX36 388 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 HESX1Q9UBX0 185 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 TJP2Q9UDY2 1190 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 PCDHA7Q9UN72 937 aa13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 ZFR2Q9UPR6 939 aaKnown RBP13.15□□□□□ -0.3
PRKCSH-210ENST00000589990 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 TYW5A2RUC4 315 aaKnown RBP13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 SUV39H1O43463 412 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 CALUO43852 315 aaPredicted RBP13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 BNIP3LO60238 219 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 NOBOXO60393 691 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 MOCS3O95396 460 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 KRT13P13646 458 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 TACR2P21452 398 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 MXI1P50539 228 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 PITX1P78337 314 aaPredicted RBP13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 ZNF177Q13360 481 aaPredicted RBP13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 BECN1Q14457 450 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 ACCSLQ4AC99 568 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 CBWD6Q4V339 395 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 ZC3H12AQ5D1E8 599 aaKnown RBP13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 CBWD3Q5JTY5 395 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 CBWD5Q5RIA9 395 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 SYPL2Q5VXT5 272 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 CXorf57Q6NSI4 855 aaKnown RBP13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 CHSY1Q86X52 802 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 SCML4Q8N228 414 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 UBR7Q8N806 425 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 FBXL13Q8NEE6 735 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 ZNF548Q8NEK5 533 aaPredicted RBP13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 SLC35F5Q8WV83 523 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 OR8D1Q8WZ84 308 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 BMFQ96LC9 184 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 CCNL2Q96S94 520 aaPredicted RBP13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 DNAI2Q9GZS0 605 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 ZSCAN16Q9H4T2 348 aaPredicted RBP13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 PCDHGA8Q9Y5G5 932 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 MYO9AB2RTY4 2548 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 NBASA2RRP1 2371 aa13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 SPTAN1Q13813 2472 aaKnown RBP13.14□□□□□ -0.31
PRKCSH-210ENST00000589990 POM121BA6NF01 834 aa13.13□□□□□ -0.31
PRKCSH-210ENST00000589990 RAD51BO15315 384 aa13.13□□□□□ -0.31
PRKCSH-210ENST00000589990 YEATS4O95619 227 aa13.13□□□□□ -0.31
PRKCSH-210ENST00000589990 PRR29P0C7W0 189 aa13.13□□□□□ -0.31
PRKCSH-210ENST00000589990 SETSIPP0DME0 302 aa13.13□□□□□ -0.31
PRKCSH-210ENST00000589990 ALPPL2P10696 532 aa13.13□□□□□ -0.31
PRKCSH-210ENST00000589990 NUDT1P36639 197 aa13.13□□□□□ -0.31
PRKCSH-210ENST00000589990 CENPCQ03188 943 aa13.13□□□□□ -0.31
PRKCSH-210ENST00000589990 CUL2Q13617 745 aa13.13□□□□□ -0.31
PRKCSH-210ENST00000589990 FGL2Q14314 439 aa13.13□□□□□ -0.31
PRKCSH-210ENST00000589990 FZD2Q14332 565 aa13.13□□□□□ -0.31
PRKCSH-210ENST00000589990 DLG2Q15700 870 aa13.13□□□□□ -0.31
PRKCSH-210ENST00000589990 DEFB133Q30KQ1 61 aa13.13□□□□□ -0.31
PRKCSH-210ENST00000589990 Q6ZSR6 202 aa13.13□□□□□ -0.31
PRKCSH-210ENST00000589990 ABI3BPQ7Z7G0 1075 aa13.13□□□□□ -0.31
PRKCSH-210ENST00000589990 CLEC14AQ86T13 490 aa13.13□□□□□ -0.31
PRKCSH-210ENST00000589990 CCAR2Q8N163 923 aaKnown RBP13.13□□□□□ -0.31
PRKCSH-210ENST00000589990 ALG14Q96F25 216 aa13.13□□□□□ -0.31
PRKCSH-210ENST00000589990 PREBQ9HCU5 417 aa13.13□□□□□ -0.31
PRKCSH-210ENST00000589990 TLR6Q9Y2C9 796 aa13.13□□□□□ -0.31
PRKCSH-210ENST00000589990 NOTCH2Q04721 2471 aa13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 RNF225M0QZC1 329 aaPredicted RBP13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 MCF2LO15068 1137 aa13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 ATP9BO43861 1147 aa13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 MT-CO1P00395 513 aa13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 VDRP11473 427 aa13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 BRD2P25440 801 aaKnown RBP13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 PSMC2P35998 433 aaKnown RBP13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 MCCD1P59942 119 aaPredicted RBP13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 LRMPQ12912 555 aa13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 ADAM9Q13443 819 aa13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 NFIL3Q16649 462 aa13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 FAM46CQ5VWP2 391 aa13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 LCLAT1Q6UWP7 414 aa13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 ATG14Q6ZNE5 492 aa13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 RBM44Q6ZP01 1051 aaKnown RBP13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 PTAR1Q7Z6K3 402 aaPredicted RBP13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 B3GNT8Q7Z7M8 397 aa13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 HORMAD1Q86X24 394 aa13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 CCDC117Q8IWD4 279 aaPredicted RBP13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 CEP57L1Q8IYX8 460 aa13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 TTC39CQ8N584 583 aa13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 IRGQQ8WZA9 623 aa13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 PRMT1Q99873 361 aaKnown RBP13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 DDX50Q9BQ39 737 aaKnown RBP13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 TCEAL2Q9H3H9 227 aaPredicted RBP13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 GPR27Q9NS67 375 aa13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 ANKMY1Q9P2S6 941 aa13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 ATXN7L1Q9ULK2 861 aaPredicted RBP13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 PNMA8BQ9ULN7 279 aaPredicted RBP13.12□□□□□ -0.31
PRKCSH-210ENST00000589990 K7ERQ8 282 aa13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 M0QYV0 167 aa13.11□□□□□ -0.31
PRKCSH-210ENST00000589990 MUSKO15146 869 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms