RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 TTC17Q96AE7 1141 aa15.52■□□□□ 0.08
ATG4D-211ENST00000589753 HDAC11Q96DB2 347 aa15.52■□□□□ 0.08
ATG4D-211ENST00000589753 SHDQ96IW2 340 aa15.52■□□□□ 0.08
ATG4D-211ENST00000589753 FAM118BQ9BPY3 351 aa15.52■□□□□ 0.08
ATG4D-211ENST00000589753 FRMD8P1Q9BZ68 369 aaPredicted RBP15.52■□□□□ 0.08
ATG4D-211ENST00000589753 CIPCQ9C0C6 399 aa15.52■□□□□ 0.08
ATG4D-211ENST00000589753 BRD8Q9H0E9 1235 aa15.52■□□□□ 0.08
ATG4D-211ENST00000589753 SP110Q9HB58 689 aa15.52■□□□□ 0.08
ATG4D-211ENST00000589753 IPO11Q9UI26 975 aaKnown RBP15.52■□□□□ 0.08
ATG4D-211ENST00000589753 VPS51Q9UID3 782 aa15.52■□□□□ 0.08
ATG4D-211ENST00000589753 R3HDM2Q9Y2K5 976 aaKnown RBP15.52■□□□□ 0.08
ATG4D-211ENST00000589753 KRBA1A5PL33 1030 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 SHISA7A6NL88 538 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 MCF2LO15068 1137 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 SNAP91O60641 907 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 MAFKO60675 156 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 ZMPSTE24O75844 475 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 ASLP04424 464 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 ATP5BP06576 529 aaKnown RBP15.51■□□□□ 0.07
ATG4D-211ENST00000589753 DRD1P21728 446 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 GLDCP23378 1020 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 TNFRSF4P43489 277 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 EIF3EP60228 445 aaKnown RBP15.51■□□□□ 0.07
ATG4D-211ENST00000589753 ZXDAP98168 799 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 IL10RBQ08334 325 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 PPIDQ08752 370 aaKnown RBP15.51■□□□□ 0.07
ATG4D-211ENST00000589753 XRCC4Q13426 336 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 DNTTIP2Q5QJE6 756 aaKnown RBP15.51■□□□□ 0.07
ATG4D-211ENST00000589753 FSTL4Q6MZW2 842 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 RETSATQ6NUM9 610 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 ZC3H18Q86VM9 953 aaKnown RBP15.51■□□□□ 0.07
ATG4D-211ENST00000589753 SIX5Q8N196 739 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 TFB1MQ8WVM0 346 aaKnown RBP15.51■□□□□ 0.07
ATG4D-211ENST00000589753 TSGA13Q96PP4 275 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 LGMNQ99538 433 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 ELOVL2Q9NXB9 296 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 CDC23Q9UJX2 597 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 CHD5Q8TDI0 1954 aa15.51■□□□□ 0.07
ATG4D-211ENST00000589753 NYNRINQ9P2P1 1898 aaKnown RBP15.5■□□□□ 0.07
ATG4D-211ENST00000589753 CXorf51AA0A1B0GTR3 108 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 ZSCAN5CA6NGD5 496 aaPredicted RBP15.5■□□□□ 0.07
ATG4D-211ENST00000589753 HACD1B0YJ81 288 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 H7C0C1 242 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 J3KR12 359 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 KRIT1O00522 736 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 PRAMEF11O60813 436 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 EGFP01133 1207 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 RBP3P10745 1247 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 CD72P21854 359 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 CCNCP24863 283 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 CTSOP43234 321 aaPredicted RBP15.5■□□□□ 0.07
ATG4D-211ENST00000589753 ATP5OP48047 213 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 GEMIN4P57678 1058 aaKnown RBP15.5■□□□□ 0.07
ATG4D-211ENST00000589753 STARD6P59095 220 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 ARF5P84085 180 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 ECT2LQ008S8 904 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 ZNF33AQ06730 810 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 AP1B1Q10567 949 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 TUBB2AQ13885 445 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 CCNG2Q16589 344 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 TIGD7Q6NT04 549 aaPredicted RBP15.5■□□□□ 0.07
ATG4D-211ENST00000589753 SFTPA1Q8IWL2 248 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 CCDC13Q8IYE1 715 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 LRRN4Q8WUT4 740 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 UCMAQ8WVF2 138 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 C1orf54Q8WWF1 131 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 ATG4AQ8WYN0 398 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 TUBB2BQ9BVA1 445 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 AP1M1Q9BXS5 423 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 HOMER3Q9NSC5 361 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 SLC25A13Q9UJS0 675 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 MRPS17Q9Y2R5 130 aaKnown RBP15.5■□□□□ 0.07
ATG4D-211ENST00000589753 UNC80Q8N2C7 3258 aa15.5■□□□□ 0.07
ATG4D-211ENST00000589753 GOLGA6L10A0A0M3HER8 536 aa15.49■□□□□ 0.07
ATG4D-211ENST00000589753 K7EQS6 105 aa15.49■□□□□ 0.07
ATG4D-211ENST00000589753 PDE2AO00408 941 aaPredicted RBP15.49■□□□□ 0.07
ATG4D-211ENST00000589753 LIASO43766 372 aa15.49■□□□□ 0.07
ATG4D-211ENST00000589753 DLDP09622 509 aaKnown RBP15.49■□□□□ 0.07
ATG4D-211ENST00000589753 SLC20A2Q08357 652 aa15.49■□□□□ 0.07
ATG4D-211ENST00000589753 PRKD1Q15139 912 aaPredicted RBP15.49■□□□□ 0.07
ATG4D-211ENST00000589753 SLC45A4Q5BKX6 768 aa15.49■□□□□ 0.07
ATG4D-211ENST00000589753 DARS2Q6PI48 645 aaKnown RBP15.49■□□□□ 0.07
ATG4D-211ENST00000589753 LINGO4Q6UY18 593 aa15.49■□□□□ 0.07
ATG4D-211ENST00000589753 LEKR1Q6ZMV7 388 aa15.49■□□□□ 0.07
ATG4D-211ENST00000589753 B4GALNT4Q76KP1 1039 aa15.49■□□□□ 0.07
ATG4D-211ENST00000589753 CDKL3Q8IVW4 592 aaPredicted RBP15.49■□□□□ 0.07
ATG4D-211ENST00000589753 PRELID2Q8N945 189 aa15.49■□□□□ 0.07
ATG4D-211ENST00000589753 SLC35B2Q8TB61 432 aa15.49■□□□□ 0.07
ATG4D-211ENST00000589753 CYB5D2Q8WUJ1 264 aa15.49■□□□□ 0.07
ATG4D-211ENST00000589753 NSMCE1Q8WV22 266 aa15.49■□□□□ 0.07
ATG4D-211ENST00000589753 SORCS1Q8WY21 1168 aa15.49■□□□□ 0.07
ATG4D-211ENST00000589753 EZH1Q92800 747 aaPredicted RBP15.49■□□□□ 0.07
ATG4D-211ENST00000589753 ZNF599Q96NL3 588 aa15.49■□□□□ 0.07
ATG4D-211ENST00000589753 QKIQ96PU8 341 aaKnown RBP eCLIP15.49■□□□□ 0.07
ATG4D-211ENST00000589753 PDFQ9HBH1 243 aa15.49■□□□□ 0.07
ATG4D-211ENST00000589753 UBA2Q9UBT2 640 aaPredicted RBP15.49■□□□□ 0.07
ATG4D-211ENST00000589753 DNPEPQ9ULA0 475 aa15.49■□□□□ 0.07
ATG4D-211ENST00000589753 NDRG2Q9UN36 371 aaKnown RBP15.49■□□□□ 0.07
ATG4D-211ENST00000589753 PLA2G4CQ9UP65 541 aa15.49■□□□□ 0.07
ATG4D-211ENST00000589753 ERVW-1Q9UQF0 538 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms