RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 FRMD8P1Q9BZ68 369 aaPredicted RBP12.45□□□□□ -0.42
DNMT1-218ENST00000589294 ATP13A1Q9HD20 1204 aa12.45□□□□□ -0.42
DNMT1-218ENST00000589294 DTLQ9NZJ0 730 aa12.45□□□□□ -0.42
DNMT1-218ENST00000589294 RNF14Q9UBS8 474 aa12.45□□□□□ -0.42
DNMT1-218ENST00000589294 MFHAS1Q9Y4C4 1052 aa12.45□□□□□ -0.42
DNMT1-218ENST00000589294 HEY1Q9Y5J3 304 aa12.45□□□□□ -0.42
DNMT1-218ENST00000589294 FAM170BA6NMN3 283 aa12.44□□□□□ -0.42
DNMT1-218ENST00000589294 CBX4O00257 560 aa12.44□□□□□ -0.42
DNMT1-218ENST00000589294 DFFAO00273 331 aa12.44□□□□□ -0.42
DNMT1-218ENST00000589294 ZMPSTE24O75844 475 aa12.44□□□□□ -0.42
DNMT1-218ENST00000589294 SRPRAP08240 638 aaKnown RBP12.44□□□□□ -0.42
DNMT1-218ENST00000589294 HNRNPLP14866 589 aaKnown RBP eCLIP12.44□□□□□ -0.42
DNMT1-218ENST00000589294 CD72P21854 359 aa12.44□□□□□ -0.42
DNMT1-218ENST00000589294 CCNCP24863 283 aa12.44□□□□□ -0.42
DNMT1-218ENST00000589294 ACVRL1P37023 503 aa12.44□□□□□ -0.42
DNMT1-218ENST00000589294 DYNLT1P63172 113 aa12.44□□□□□ -0.42
DNMT1-218ENST00000589294 MRPS21P82921 87 aaKnown RBP12.44□□□□□ -0.42
DNMT1-218ENST00000589294 IL10RBQ08334 325 aa12.44□□□□□ -0.42
DNMT1-218ENST00000589294 XRCC4Q13426 336 aa12.44□□□□□ -0.42
DNMT1-218ENST00000589294 CCINQ13939 588 aa12.44□□□□□ -0.42
DNMT1-218ENST00000589294 LRRC32Q14392 662 aa12.44□□□□□ -0.42
DNMT1-218ENST00000589294 TMCO4Q5TGY1 634 aa12.44□□□□□ -0.42
DNMT1-218ENST00000589294 METTL3Q86U44 580 aaKnown RBP12.44□□□□□ -0.42
DNMT1-218ENST00000589294 ACTRT1Q8TDG2 376 aa12.44□□□□□ -0.42
DNMT1-218ENST00000589294 CASKIN2Q8WXE0 1202 aa12.44□□□□□ -0.42
DNMT1-218ENST00000589294 HERPUD2Q9BSE4 406 aa12.44□□□□□ -0.42
DNMT1-218ENST00000589294 CIPCQ9C0C6 399 aa12.44□□□□□ -0.42
DNMT1-218ENST00000589294 HOMER3Q9NSC5 361 aa12.44□□□□□ -0.42
DNMT1-218ENST00000589294 IPO11Q9UI26 975 aaKnown RBP12.44□□□□□ -0.42
DNMT1-218ENST00000589294 VPS51Q9UID3 782 aa12.44□□□□□ -0.42
DNMT1-218ENST00000589294 COL4A2P08572 1712 aa12.44□□□□□ -0.42
DNMT1-218ENST00000589294 HACD1B0YJ81 288 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 STK25O00506 426 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 PPP1R12AO14974 1030 aaPredicted RBP12.43□□□□□ -0.42
DNMT1-218ENST00000589294 FANCGO15287 622 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 MFSD11O43934 449 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 MAFKO60675 156 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 PRAMEF11O60813 436 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 ZNF189O75820 626 aaPredicted RBP12.43□□□□□ -0.42
DNMT1-218ENST00000589294 EGFP01133 1207 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 FGGP02679 453 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 CHRNB1P11230 501 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 NNMTP40261 264 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 GARSP41250 739 aaKnown RBP12.43□□□□□ -0.42
DNMT1-218ENST00000589294 KIR2DL1P43626 348 aaPredicted RBP12.43□□□□□ -0.42
DNMT1-218ENST00000589294 RFTN1Q14699 578 aaPredicted RBP12.43□□□□□ -0.42
DNMT1-218ENST00000589294 LONRF2Q1L5Z9 754 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 HSF5Q4G112 596 aaPredicted RBP12.43□□□□□ -0.42
DNMT1-218ENST00000589294 INO80DQ53TQ3 878 aaPredicted RBP12.43□□□□□ -0.42
DNMT1-218ENST00000589294 TRMT11Q7Z4G4 463 aaKnown RBP12.43□□□□□ -0.42
DNMT1-218ENST00000589294 ZNF354CQ86Y25 554 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 COG1Q8WTW3 980 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 EZH1Q92800 747 aaPredicted RBP12.43□□□□□ -0.42
DNMT1-218ENST00000589294 CLDN23Q96B33 292 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 HDAC11Q96DB2 347 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 ZNF599Q96NL3 588 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 OLFM3Q96PB7 478 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 TBC1D17Q9HA65 648 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 LMAN1LQ9HAT1 526 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 LTB4R2Q9NPC1 389 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 THAP10Q9P2Z0 257 aaPredicted RBP12.43□□□□□ -0.42
DNMT1-218ENST00000589294 SAE1Q9UBE0 346 aaPredicted RBP12.43□□□□□ -0.42
DNMT1-218ENST00000589294 NDRG2Q9UN36 371 aaKnown RBP12.43□□□□□ -0.42
DNMT1-218ENST00000589294 ERVW-1Q9UQF0 538 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 HS3ST2Q9Y278 367 aa12.43□□□□□ -0.42
DNMT1-218ENST00000589294 ESPNB1AK53 854 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 PGRMC1O00264 195 aaKnown RBP12.42□□□□□ -0.42
DNMT1-218ENST00000589294 MATN3O15232 486 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 MTSS1O43312 755 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 ZNF500O60304 480 aaPredicted RBP12.42□□□□□ -0.42
DNMT1-218ENST00000589294 SNAP91O60641 907 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 PECAM1P16284 738 aaPredicted RBP12.42□□□□□ -0.42
DNMT1-218ENST00000589294 RENBPP51606 427 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 CLCN6P51797 869 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 ST8SIA6P61647 398 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 OTUD4Q01804 1114 aaKnown RBP12.42□□□□□ -0.42
DNMT1-218ENST00000589294 PPIDQ08752 370 aaKnown RBP12.42□□□□□ -0.42
DNMT1-218ENST00000589294 FZD5Q13467 585 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 TUBB2AQ13885 445 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 UBXN2BQ14CS0 331 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 SDE2Q6IQ49 451 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 TIGD7Q6NT04 549 aaPredicted RBP12.42□□□□□ -0.42
DNMT1-218ENST00000589294 NPNTQ6UXI9 565 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 CREG2Q8IUH2 290 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 TP53INP2Q8IXH6 220 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 ATPAF2Q8N5M1 289 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 CCNYQ8ND76 341 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 KIF18AQ8NI77 898 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 ACTL9Q8TC94 416 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 NSMCE1Q8WV22 266 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 MRGPRX3Q96LB0 322 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 TUBB2BQ9BVA1 445 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 MFSD1Q9H3U5 465 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 SLC25A13Q9UJS0 675 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 SLC8A2Q9UPR5 921 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 SIT1Q9Y3P8 196 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 MTF2Q9Y483 593 aaPredicted RBP12.42□□□□□ -0.42
DNMT1-218ENST00000589294 NUP205Q92621 2012 aa12.42□□□□□ -0.42
DNMT1-218ENST00000589294 TCRBV7S2A1N4TA0A589 114 aa12.41□□□□□ -0.42
DNMT1-218ENST00000589294 TMEM221A6NGB7 291 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms