RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 ZNF419Q96HQ0 510 aaPredicted RBP11.66□□□□□ -0.54
SMAD4-205ENST00000588745 PKNOX2Q96KN3 472 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 AGAP3Q96P47 875 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 GORASP1Q9BQQ3 440 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 WDR83Q9BRX9 315 aaKnown RBP11.66□□□□□ -0.54
SMAD4-205ENST00000588745 TASP1Q9H6P5 420 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 TLE6Q9H808 572 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 SLC28A3Q9HAS3 691 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 CFAP97Q9P2B7 532 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 ZNF510Q9Y2H8 683 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 SH3BP1Q9Y3L3 701 aa11.66□□□□□ -0.54
SMAD4-205ENST00000588745 NOTCH4Q99466 2003 aa11.65□□□□□ -0.54
SMAD4-205ENST00000588745 TYW5A2RUC4 315 aaKnown RBP11.65□□□□□ -0.55
SMAD4-205ENST00000588745 EPOPA6NHQ4 379 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 ERI2A8K979 691 aaKnown RBP11.65□□□□□ -0.55
SMAD4-205ENST00000588745 LEFTY2O00292 366 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 SCAMP3O14828 347 aaKnown RBP11.65□□□□□ -0.55
SMAD4-205ENST00000588745 CACNG3O60359 315 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 RNF40O75150 1001 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 SUN1O94901 812 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 AP2A1O95782 977 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 PEX11BO96011 259 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 HLA-DQB2P05538 268 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 MYZAPP0CAP1 466 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 MLNP12872 115 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 ACVRL1P37023 503 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 AVPR1AP37288 418 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 NRIP1P48552 1158 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 IL10RBQ08334 325 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 SERINC3Q13530 473 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 HNRNPDQ14103 355 aaKnown RBP11.65□□□□□ -0.55
SMAD4-205ENST00000588745 KRT71Q3SY84 523 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 CCDC38Q502W7 563 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 DNAJC21Q5F1R6 531 aaKnown RBP11.65□□□□□ -0.55
SMAD4-205ENST00000588745 ZNF697Q5TEC3 545 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 CROCCP2Q86T23 111 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 ZNF354CQ86Y25 554 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 KLHDC8BQ8IXV7 354 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 CMTM8Q8IZV2 173 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 CPXM2Q8N436 756 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 ATP11CQ8NB49 1132 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 UHMK1Q8TAS1 419 aaKnown RBP11.65□□□□□ -0.55
SMAD4-205ENST00000588745 PYROXD1Q8WU10 500 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 ARHGEF2Q92974 986 aaKnown RBP11.65□□□□□ -0.55
SMAD4-205ENST00000588745 MLPHQ9BV36 600 aaPredicted RBP11.65□□□□□ -0.55
SMAD4-205ENST00000588745 TMEM109Q9BVC6 243 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 MAGEH1Q9H213 219 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 ZMYM5Q9UJ78 669 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 CHMP2BQ9UQN3 213 aa11.65□□□□□ -0.55
SMAD4-205ENST00000588745 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.65□□□□□ -0.55
SMAD4-205ENST00000588745 CHD7Q9P2D1 2997 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 MYO7AQ13402 2215 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 MYO18AQ92614 2054 aaKnown RBP11.64□□□□□ -0.55
SMAD4-205ENST00000588745 LAMA2P24043 3122 aaKnown RBP11.64□□□□□ -0.55
SMAD4-205ENST00000588745 A0A087WUV0 522 aaPredicted RBP11.64□□□□□ -0.55
SMAD4-205ENST00000588745 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.64□□□□□ -0.55
SMAD4-205ENST00000588745 CCDC195A0A1B0GUA6 201 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 ILVBLA1L0T0 632 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 GOLGA6CA6NDK9 693 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 J3KR12 359 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 PRAMEF11O60813 436 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 NEBLO76041 1014 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 PAPLNO95428 1278 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 RHOCP08134 193 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 GOLGA6DP0CG33 693 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 TSHRP16473 764 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 HOXD9P28356 352 aaPredicted RBP11.64□□□□□ -0.55
SMAD4-205ENST00000588745 ELK3P41970 407 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 IFNAR2P48551 515 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 NTHL1P78549 312 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 GNA12Q03113 381 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 TNK2Q07912 1038 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 ZNF177Q13360 481 aaPredicted RBP11.64□□□□□ -0.55
SMAD4-205ENST00000588745 MTM1Q13496 603 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 PRPSAP1Q14558 356 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 TTMPQ5BVD1 217 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 HP1BP3Q5SSJ5 553 aaPredicted RBP11.64□□□□□ -0.55
SMAD4-205ENST00000588745 LRRC8BQ6P9F7 803 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 GRASPQ7Z6J2 395 aaPredicted RBP11.64□□□□□ -0.55
SMAD4-205ENST00000588745 SETD3Q86TU7 594 aaPredicted RBP11.64□□□□□ -0.55
SMAD4-205ENST00000588745 BBS7Q8IWZ6 715 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 AGGF1Q8N302 714 aaeCLIP11.64□□□□□ -0.55
SMAD4-205ENST00000588745 SH3RF2Q8TEC5 729 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 NSMCE1Q8WV22 266 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 ARL8AQ96BM9 186 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 LRRC39Q96DD0 335 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 PABPC5Q96DU9 382 aaKnown RBP11.64□□□□□ -0.55
SMAD4-205ENST00000588745 PPP1R2P1Q96PQ5 205 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 FCRL5Q96RD9 977 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 CDCA3Q99618 268 aaPredicted RBP11.64□□□□□ -0.55
SMAD4-205ENST00000588745 SMG9Q9H0W8 520 aaKnown RBP11.64□□□□□ -0.55
SMAD4-205ENST00000588745 SFXN1Q9H9B4 322 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 VPS37BQ9H9H4 285 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 PDFQ9HBH1 243 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 TMBIM4Q9HC24 238 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 GLOD4Q9HC38 313 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 LRRC4CQ9HCJ2 640 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 RBM22Q9NW64 420 aaKnown RBP eCLIP11.64□□□□□ -0.557e-12■■■■□ 24.3
SMAD4-205ENST00000588745 GOLGA6AQ9NYA3 693 aa11.64□□□□□ -0.55
SMAD4-205ENST00000588745 TBC1D30Q9Y2I9 924 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms