RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 CDH7Q9ULB5 785 aa8.72□□□□□ -1.01
NPC1-204ENST00000586718 CCL26Q9Y258 94 aa8.72□□□□□ -1.01
NPC1-204ENST00000586718 MTCH2Q9Y6C9 303 aa8.72□□□□□ -1.01
NPC1-204ENST00000586718 DOCK6Q96HP0 2047 aa8.71□□□□□ -1.01
NPC1-204ENST00000586718 MYO9BQ13459 2157 aa8.71□□□□□ -1.01
NPC1-204ENST00000586718 ERI2A8K979 691 aaKnown RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 NRG2O14511 850 aaPredicted RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 PSMD3O43242 534 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 MAFKO60675 156 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 PRAMEF11O60813 436 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 TBX10O75333 385 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 JCHAINP01591 159 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 APRTP07741 180 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 CCNB1P14635 433 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 PSMB4P28070 264 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 ECHS1P30084 290 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 GBP2P32456 591 aaPredicted RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 MMP13P45452 471 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 SGSHP51688 502 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 ZXDBP98169 803 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 CDK16Q00536 496 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 WASHC5Q12768 1159 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 ZBTB17Q13105 803 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 SERINC3Q13530 473 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 SEMA5AQ13591 1074 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 SLC12A1Q13621 1099 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 HNRNPDQ14103 355 aaKnown RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 RFTN1Q14699 578 aaPredicted RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 HIF1AQ16665 826 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 PARP6Q2NL67 630 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 TEX44Q53QW1 395 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 DNAJC21Q5F1R6 531 aaKnown RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 BEND6Q5SZJ8 279 aaPredicted RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 FAXCQ5TGI0 409 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 MARC1Q5VT66 337 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 PRPF38BQ5VTL8 546 aaKnown RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 RNF219Q5W0B1 726 aaPredicted RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 HIBCHQ6NVY1 386 aaPredicted RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 SYCE2Q6PIF2 218 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 TPGS1Q6ZTW0 290 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 CENPUQ71F23 418 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 PID1Q7Z2X4 250 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 HDXQ7Z353 690 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 PRUNE1Q86TP1 453 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 METTL3Q86U44 580 aaKnown RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 TP53INP2Q8IXH6 220 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 YAF2Q8IY57 180 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 PDIK1LQ8N165 341 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 MREGQ8N565 214 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 TAB3Q8N5C8 712 aaPredicted RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 DCAF4L2Q8NA75 395 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 BPIFB1Q8TDL5 484 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 USP33Q8TEY7 942 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 LRRN4Q8WUT4 740 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 MAML1Q92585 1016 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 PRCCQ92733 491 aaPredicted RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 FGF13Q92913 245 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 ARHGEF2Q92974 986 aaKnown RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 ATP2A3Q93084 1043 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 MYEOVQ96EZ4 313 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 ASB16Q96NS5 453 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 AGAP3Q96P47 875 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 CINPQ9BW66 212 aaPredicted RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 BBS2Q9BXC9 721 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 CEP41Q9BYV8 373 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 NEUROG2Q9H2A3 272 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 TTYH1Q9H313 450 aaPredicted RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 NOL6Q9H6R4 1146 aaKnown RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 XAB2Q9HCS7 855 aaKnown RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 DUS2Q9NX74 493 aaKnown RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 KIAA1522Q9P206 1035 aaPredicted RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 UBA2Q9UBT2 640 aaPredicted RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 ZNF212Q9UDV6 495 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 COLQQ9Y215 455 aaPredicted RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 TBC1D30Q9Y2I9 924 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 FARP1Q9Y4F1 1045 aaPredicted RBP8.71□□□□□ -1.02
NPC1-204ENST00000586718 CDH23Q9H251 3354 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 TRIOBPQ9H2D6 2365 aa8.71□□□□□ -1.02
NPC1-204ENST00000586718 NUP205Q92621 2012 aa8.7□□□□□ -1.02
NPC1-204ENST00000586718 NEDD8-MDP1E9PL57 170 aa8.7□□□□□ -1.02
NPC1-204ENST00000586718 AP3B1O00203 1094 aa8.7□□□□□ -1.02
NPC1-204ENST00000586718 GFRA2O00451 464 aa8.7□□□□□ -1.02
NPC1-204ENST00000586718 EIF3HO15372 352 aaKnown RBP eCLIP8.7□□□□□ -1.02
NPC1-204ENST00000586718 KDELR3O43731 214 aa8.7□□□□□ -1.02
NPC1-204ENST00000586718 PPFIA2O75334 1257 aa8.7□□□□□ -1.02
NPC1-204ENST00000586718 ANXA9O76027 345 aa8.7□□□□□ -1.02
NPC1-204ENST00000586718 PENKP01210 267 aaPredicted RBP8.7□□□□□ -1.02
NPC1-204ENST00000586718 NFKB1P19838 968 aa8.7□□□□□ -1.02
NPC1-204ENST00000586718 POU3F3P20264 500 aaPredicted RBP8.7□□□□□ -1.02
NPC1-204ENST00000586718 IVDP26440 423 aa8.7□□□□□ -1.02
NPC1-204ENST00000586718 HOXD9P28356 352 aaPredicted RBP8.7□□□□□ -1.02
NPC1-204ENST00000586718 ACVRL1P37023 503 aa8.7□□□□□ -1.02
NPC1-204ENST00000586718 HSPA9P38646 679 aaKnown RBP8.7□□□□□ -1.02
NPC1-204ENST00000586718 MAGEA6P43360 314 aa8.7□□□□□ -1.02
NPC1-204ENST00000586718 GEMP55040 296 aa8.7□□□□□ -1.02
NPC1-204ENST00000586718 DHX9Q08211 1270 aaKnown RBP8.7□□□□□ -1.02
NPC1-204ENST00000586718 ITKQ08881 620 aa8.7□□□□□ -1.02
NPC1-204ENST00000586718 GPS2Q13227 327 aa8.7□□□□□ -1.02
NPC1-204ENST00000586718 KCNJ11Q14654 390 aa8.7□□□□□ -1.02
NPC1-204ENST00000586718 LBRQ14739 615 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms