RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 CACNA2D2Q9NY47 1150 aa19.61■□□□□ 0.73
DDX39A-204ENST00000586558 HS3ST2Q9Y278 367 aa19.61■□□□□ 0.73
DDX39A-204ENST00000586558 ANTXRLA6NF34 631 aa19.6■□□□□ 0.73
DDX39A-204ENST00000586558 ARHGAP42A6NI28 874 aa19.6■□□□□ 0.73
DDX39A-204ENST00000586558 CBX4O00257 560 aa19.6■□□□□ 0.73
DDX39A-204ENST00000586558 ADAM23O75077 832 aa19.6■□□□□ 0.73
DDX39A-204ENST00000586558 ZMPSTE24O75844 475 aa19.6■□□□□ 0.73
DDX39A-204ENST00000586558 FTCDO95954 541 aa19.6■□□□□ 0.73
DDX39A-204ENST00000586558 HOXB2P14652 356 aa19.6■□□□□ 0.73
DDX39A-204ENST00000586558 ACVRL1P37023 503 aa19.6■□□□□ 0.73
DDX39A-204ENST00000586558 IL12RB1P42701 662 aa19.6■□□□□ 0.73
DDX39A-204ENST00000586558 CTSOP43234 321 aaPredicted RBP19.6■□□□□ 0.73
DDX39A-204ENST00000586558 MARCKSL1P49006 195 aa19.6■□□□□ 0.73
DDX39A-204ENST00000586558 RWDD2BP57060 319 aa19.6■□□□□ 0.73
DDX39A-204ENST00000586558 SERINC3Q13530 473 aa19.6■□□□□ 0.73
DDX39A-204ENST00000586558 STARD3Q14849 445 aa19.6■□□□□ 0.73
DDX39A-204ENST00000586558 TAZQ16635 292 aa19.6■□□□□ 0.73
DDX39A-204ENST00000586558 NPWQ8N729 165 aa19.6■□□□□ 0.73
DDX39A-204ENST00000586558 KRT35Q92764 455 aa19.6■□□□□ 0.73
DDX39A-204ENST00000586558 HMCESQ96FZ2 354 aa19.6■□□□□ 0.73
DDX39A-204ENST00000586558 PRRX2Q99811 253 aa19.6■□□□□ 0.73
DDX39A-204ENST00000586558 ETNK2Q9NVF9 386 aa19.6■□□□□ 0.73
DDX39A-204ENST00000586558 SLC8A2Q9UPR5 921 aa19.6■□□□□ 0.73
DDX39A-204ENST00000586558 GOLGA6L9A6NEM1 432 aa19.59■□□□□ 0.73
DDX39A-204ENST00000586558 GALR2O43603 387 aaPredicted RBP19.59■□□□□ 0.73
DDX39A-204ENST00000586558 KDELR3O43731 214 aa19.59■□□□□ 0.73
DDX39A-204ENST00000586558 SNAP91O60641 907 aa19.59■□□□□ 0.73
DDX39A-204ENST00000586558 ZFXP17010 805 aaPredicted RBP19.59■□□□□ 0.73
DDX39A-204ENST00000586558 CDKN2BP42772 138 aa19.59■□□□□ 0.73
DDX39A-204ENST00000586558 PEX5P50542 639 aa19.59■□□□□ 0.73
DDX39A-204ENST00000586558 CLCN6P51797 869 aa19.59■□□□□ 0.73
DDX39A-204ENST00000586558 COPS2P61201 443 aa19.59■□□□□ 0.73
DDX39A-204ENST00000586558 PAFAH1B3Q15102 231 aaKnown RBP19.59■□□□□ 0.73
DDX39A-204ENST00000586558 CRY1Q16526 586 aa19.59■□□□□ 0.73
DDX39A-204ENST00000586558 MFSD7Q6UXD7 560 aa19.59■□□□□ 0.73
DDX39A-204ENST00000586558 SPOCD1Q6ZMY3 1216 aa19.59■□□□□ 0.73
DDX39A-204ENST00000586558 METTL3Q86U44 580 aaKnown RBP19.59■□□□□ 0.73
DDX39A-204ENST00000586558 LRRC49Q8IUZ0 686 aa19.59■□□□□ 0.73
DDX39A-204ENST00000586558 ARHGAP12Q8IWW6 846 aa19.59■□□□□ 0.73
DDX39A-204ENST00000586558 REXO1L1PQ8IX06 675 aa19.59■□□□□ 0.73
DDX39A-204ENST00000586558 CAMKK1Q8N5S9 505 aa19.59■□□□□ 0.73
DDX39A-204ENST00000586558 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.59■□□□□ 0.73
DDX39A-204ENST00000586558 RNF25Q96BH1 459 aaPredicted RBP19.59■□□□□ 0.73
DDX39A-204ENST00000586558 MYO19Q96H55 970 aa19.59■□□□□ 0.73
DDX39A-204ENST00000586558 MAK16Q9BXY0 300 aaKnown RBP19.59■□□□□ 0.73
DDX39A-204ENST00000586558 ZDHHC4Q9NPG8 344 aa19.59■□□□□ 0.73
DDX39A-204ENST00000586558 SUN2Q9UH99 717 aa19.59■□□□□ 0.73
DDX39A-204ENST00000586558 FBXO4Q9UKT5 387 aa19.59■□□□□ 0.73
DDX39A-204ENST00000586558 KMT2EQ8IZD2 1858 aa19.58■□□□□ 0.73
DDX39A-204ENST00000586558 MUC22E2RYF6 1773 aaPredicted RBP19.58■□□□□ 0.73
DDX39A-204ENST00000586558 ATP9BO43861 1147 aa19.58■□□□□ 0.72
DDX39A-204ENST00000586558 HOXA6P31267 233 aa19.58■□□□□ 0.72
DDX39A-204ENST00000586558 CETN2P41208 172 aa19.58■□□□□ 0.72
DDX39A-204ENST00000586558 WASP42768 502 aa19.58■□□□□ 0.72
DDX39A-204ENST00000586558 STK19P49842 368 aaPredicted RBP19.58■□□□□ 0.72
DDX39A-204ENST00000586558 SATB1Q01826 763 aa19.58■□□□□ 0.72
DDX39A-204ENST00000586558 TFDP2Q14188 446 aa19.58■□□□□ 0.72
DDX39A-204ENST00000586558 PPP2R5EQ16537 467 aa19.58■□□□□ 0.72
DDX39A-204ENST00000586558 HNRNPA1L2Q32P51 320 aaKnown RBP19.58■□□□□ 0.72
DDX39A-204ENST00000586558 TFDP3Q5H9I0 405 aa19.58■□□□□ 0.72
DDX39A-204ENST00000586558 NCBP2-AS2Q69YL0 99 aa19.58■□□□□ 0.72
DDX39A-204ENST00000586558 SLC9A4Q6AI14 798 aa19.58■□□□□ 0.72
DDX39A-204ENST00000586558 ZNF354CQ86Y25 554 aa19.58■□□□□ 0.72
DDX39A-204ENST00000586558 SH2D3CQ8N5H7 860 aa19.58■□□□□ 0.72
DDX39A-204ENST00000586558 PQLC3Q8N755 202 aa19.58■□□□□ 0.72
DDX39A-204ENST00000586558 HES6Q96HZ4 224 aa19.58■□□□□ 0.72
DDX39A-204ENST00000586558 CELF6Q96J87 481 aaKnown RBP19.58■□□□□ 0.72
DDX39A-204ENST00000586558 RPL10LQ96L21 214 aaKnown RBP19.58■□□□□ 0.72
DDX39A-204ENST00000586558 SLC39A8Q9C0K1 460 aa19.58■□□□□ 0.72
DDX39A-204ENST00000586558 FBRSQ9HAH7 460 aa19.58■□□□□ 0.72
DDX39A-204ENST00000586558 POLMQ9NP87 494 aaPredicted RBP19.58■□□□□ 0.72
DDX39A-204ENST00000586558 EDDM13A0A1B0GTR0 161 aa19.57■□□□□ 0.72
DDX39A-204ENST00000586558 A0A1W2PQF6 199 aa19.57■□□□□ 0.72
DDX39A-204ENST00000586558 WASH3PC4AMC7 463 aa19.57■□□□□ 0.72
DDX39A-204ENST00000586558 APOL1O14791 398 aa19.57■□□□□ 0.72
DDX39A-204ENST00000586558 SYNCRIPO60506 623 aaKnown RBP19.57■□□□□ 0.72
DDX39A-204ENST00000586558 EPHX1P07099 455 aa19.57■□□□□ 0.72
DDX39A-204ENST00000586558 PRKCHP24723 683 aa19.57■□□□□ 0.72
DDX39A-204ENST00000586558 PTPN7P35236 360 aa19.57■□□□□ 0.72
DDX39A-204ENST00000586558 SERPINH1P50454 418 aaKnown RBP19.57■□□□□ 0.72
DDX39A-204ENST00000586558 PAPOLAP51003 745 aaKnown RBP19.57■□□□□ 0.72
DDX39A-204ENST00000586558 ARF5P84085 180 aa19.57■□□□□ 0.72
DDX39A-204ENST00000586558 CAMK2GQ13555 558 aaPredicted RBP19.57■□□□□ 0.72
DDX39A-204ENST00000586558 CCDC50Q8IVM0 306 aa19.57■□□□□ 0.72
DDX39A-204ENST00000586558 ATP11CQ8NB49 1132 aa19.57■□□□□ 0.72
DDX39A-204ENST00000586558 TSTD1Q8NFU3 115 aa19.57■□□□□ 0.72
DDX39A-204ENST00000586558 CASKIN2Q8WXE0 1202 aa19.57■□□□□ 0.72
DDX39A-204ENST00000586558 ALG3Q92685 438 aa19.57■□□□□ 0.72
DDX39A-204ENST00000586558 C2orf42Q9NWW7 574 aa19.57■□□□□ 0.72
DDX39A-204ENST00000586558 SLCO3A1Q9UIG8 710 aa19.57■□□□□ 0.72
DDX39A-204ENST00000586558 PYCARDQ9ULZ3 195 aa19.57■□□□□ 0.72
DDX39A-204ENST00000586558 EFR3BQ9Y2G0 817 aa19.57■□□□□ 0.72
DDX39A-204ENST00000586558 MFHAS1Q9Y4C4 1052 aa19.57■□□□□ 0.72
DDX39A-204ENST00000586558 RAD54BQ9Y620 910 aa19.57■□□□□ 0.72
DDX39A-204ENST00000586558 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.57■□□□□ 0.72
DDX39A-204ENST00000586558 ZNF318Q5VUA4 2279 aa19.56■□□□□ 0.72
DDX39A-204ENST00000586558 TARSL2A2RTX5 802 aaKnown RBP19.56■□□□□ 0.72
DDX39A-204ENST00000586558 DFFAO00273 331 aa19.56■□□□□ 0.72
DDX39A-204ENST00000586558 ZBTB24O43167 697 aaPredicted RBP19.56■□□□□ 0.72
DDX39A-204ENST00000586558 MFSD11O43934 449 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms