RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 MSS51Q4VC12 460 aa14.29□□□□□ -0.12
UBBP4-202ENST00000584755 MPP7Q5T2T1 576 aa14.29□□□□□ -0.12
UBBP4-202ENST00000584755 C6orf118Q5T5N4 469 aa14.29□□□□□ -0.12
UBBP4-202ENST00000584755 KCTD11Q693B1 232 aa14.29□□□□□ -0.12
UBBP4-202ENST00000584755 CXorf57Q6NSI4 855 aaKnown RBP14.29□□□□□ -0.12
UBBP4-202ENST00000584755 POTEHQ6S545 545 aa14.29□□□□□ -0.12
UBBP4-202ENST00000584755 ZNF783Q6ZMS7 281 aa14.29□□□□□ -0.12
UBBP4-202ENST00000584755 ZNF534Q76KX8 674 aa14.29□□□□□ -0.12
UBBP4-202ENST00000584755 CAND1Q86VP6 1230 aaKnown RBP14.29□□□□□ -0.12
UBBP4-202ENST00000584755 PDIK1LQ8N165 341 aa14.29□□□□□ -0.12
UBBP4-202ENST00000584755 TEX26Q8N6G2 289 aa14.29□□□□□ -0.12
UBBP4-202ENST00000584755 HJURPQ8NCD3 748 aaPredicted RBP14.29□□□□□ -0.12
UBBP4-202ENST00000584755 SH3RF2Q8TEC5 729 aa14.29□□□□□ -0.12
UBBP4-202ENST00000584755 SMG7Q92540 1137 aaKnown RBP14.29□□□□□ -0.12
UBBP4-202ENST00000584755 USP13Q92995 863 aaPredicted RBP14.29□□□□□ -0.12
UBBP4-202ENST00000584755 PPP2R3CQ969Q6 453 aa14.29□□□□□ -0.12
UBBP4-202ENST00000584755 PDFQ9HBH1 243 aa14.29□□□□□ -0.12
UBBP4-202ENST00000584755 SAYSD1Q9NPB0 183 aa14.29□□□□□ -0.12
UBBP4-202ENST00000584755 DNAJC17Q9NVM6 304 aaKnown RBP14.29□□□□□ -0.12
UBBP4-202ENST00000584755 SH3BP1Q9Y3L3 701 aa14.29□□□□□ -0.12
UBBP4-202ENST00000584755 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.28□□□□□ -0.12
UBBP4-202ENST00000584755 ERI2A8K979 691 aaKnown RBP14.28□□□□□ -0.12
UBBP4-202ENST00000584755 J3KR12 359 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 TSPAN3O60637 253 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 PRAMEF11O60813 436 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 SUN1O94901 812 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 ABHD2P08910 425 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 MLNP12872 115 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 NFKB1P19838 968 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 HOXD9P28356 352 aaPredicted RBP14.28□□□□□ -0.12
UBBP4-202ENST00000584755 ACVRL1P37023 503 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 EIF3BP55884 814 aaKnown RBP14.28□□□□□ -0.12
UBBP4-202ENST00000584755 PDIA2Q13087 525 aaKnown RBP14.28□□□□□ -0.12
UBBP4-202ENST00000584755 USP4Q13107 963 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 ZNF177Q13360 481 aaPredicted RBP14.28□□□□□ -0.12
UBBP4-202ENST00000584755 SLC29A2Q14542 456 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 UBAP2Q5T6F2 1119 aaKnown RBP14.28□□□□□ -0.12
UBBP4-202ENST00000584755 DENND2CQ68D51 928 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 BBS7Q8IWZ6 715 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 KIAA1958Q8N8K9 716 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 OR52K2Q8NGK3 314 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 TMA16Q96EY4 203 aaKnown RBP14.28□□□□□ -0.12
UBBP4-202ENST00000584755 PKNOX2Q96KN3 472 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 TTC25Q96NG3 672 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 ZNF599Q96NL3 588 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 AGAP3Q96P47 875 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 FCRL5Q96RD9 977 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 WDR83Q9BRX9 315 aaKnown RBP14.28□□□□□ -0.12
UBBP4-202ENST00000584755 TMEM109Q9BVC6 243 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 ACE2Q9BYF1 805 aaPredicted RBP14.28□□□□□ -0.12
UBBP4-202ENST00000584755 XAB2Q9HCS7 855 aaKnown RBP14.28□□□□□ -0.12
UBBP4-202ENST00000584755 MED4Q9NPJ6 270 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 TDP1Q9NUW8 608 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 RSPH14Q9UHP6 348 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 CCL26Q9Y258 94 aa14.28□□□□□ -0.12
UBBP4-202ENST00000584755 MYO18AQ92614 2054 aaKnown RBP14.27□□□□□ -0.12
UBBP4-202ENST00000584755 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.27□□□□□ -0.12
UBBP4-202ENST00000584755 A0A0D9SEW6 157 aa14.27□□□□□ -0.12
UBBP4-202ENST00000584755 E7EVH7 732 aa14.27□□□□□ -0.12
UBBP4-202ENST00000584755 RFXAPO00287 272 aa14.27□□□□□ -0.12
UBBP4-202ENST00000584755 AP2A1O95782 977 aa14.27□□□□□ -0.12
UBBP4-202ENST00000584755 SYF2O95926 243 aaKnown RBP14.27□□□□□ -0.12
UBBP4-202ENST00000584755 TSHRP16473 764 aa14.27□□□□□ -0.12
UBBP4-202ENST00000584755 CEBPBP17676 345 aa14.27□□□□□ -0.12
UBBP4-202ENST00000584755 RENBPP51606 427 aa14.27□□□□□ -0.12
UBBP4-202ENST00000584755 GPS2Q13227 327 aa14.27□□□□□ -0.12
UBBP4-202ENST00000584755 FASTKD3Q14CZ7 662 aaKnown RBP14.27□□□□□ -0.12
UBBP4-202ENST00000584755 ZNF77Q15935 545 aa14.27□□□□□ -0.12
UBBP4-202ENST00000584755 KYNUQ16719 465 aa14.27□□□□□ -0.12
UBBP4-202ENST00000584755 C12orf76Q8N812 135 aaPredicted RBP14.27□□□□□ -0.12
UBBP4-202ENST00000584755 RIN3Q8TB24 985 aa14.27□□□□□ -0.12
UBBP4-202ENST00000584755 LRRC39Q96DD0 335 aa14.27□□□□□ -0.12
UBBP4-202ENST00000584755 PPP1R2P1Q96PQ5 205 aa14.27□□□□□ -0.12
UBBP4-202ENST00000584755 MLPHQ9BV36 600 aaPredicted RBP14.27□□□□□ -0.12
UBBP4-202ENST00000584755 SMG9Q9H0W8 520 aaKnown RBP14.27□□□□□ -0.12
UBBP4-202ENST00000584755 SP110Q9HB58 689 aa14.27□□□□□ -0.12
UBBP4-202ENST00000584755 GLOD4Q9HC38 313 aa14.27□□□□□ -0.12
UBBP4-202ENST00000584755 RBM22Q9NW64 420 aaKnown RBP eCLIP14.27□□□□□ -0.12
UBBP4-202ENST00000584755 OGFRQ9NZT2 677 aa14.27□□□□□ -0.12
UBBP4-202ENST00000584755 MRPS23Q9Y3D9 190 aaKnown RBP14.27□□□□□ -0.12
UBBP4-202ENST00000584755 TEX264Q9Y6I9 313 aa14.27□□□□□ -0.12
UBBP4-202ENST00000584755 NUP210Q8TEM1 1887 aaPredicted RBP14.27□□□□□ -0.13
UBBP4-202ENST00000584755 CDH23Q9H251 3354 aa14.26□□□□□ -0.13
UBBP4-202ENST00000584755 TYW5A2RUC4 315 aaKnown RBP14.26□□□□□ -0.13
UBBP4-202ENST00000584755 SPDYE4A6NLX3 237 aa14.26□□□□□ -0.13
UBBP4-202ENST00000584755 SCAMP3O14828 347 aaKnown RBP14.26□□□□□ -0.13
UBBP4-202ENST00000584755 KDELR3O43731 214 aa14.26□□□□□ -0.13
UBBP4-202ENST00000584755 TBL1XO60907 577 aa14.26□□□□□ -0.13
UBBP4-202ENST00000584755 LUC7L3O95232 432 aaKnown RBP14.26□□□□□ -0.13
UBBP4-202ENST00000584755 PRAMEF12O95522 483 aa14.26□□□□□ -0.13
UBBP4-202ENST00000584755 GLP2RO95838 553 aa14.26□□□□□ -0.13
UBBP4-202ENST00000584755 HLA-DQB2P05538 268 aa14.26□□□□□ -0.13
UBBP4-202ENST00000584755 RHOCP08134 193 aa14.26□□□□□ -0.13
UBBP4-202ENST00000584755 ETFBP38117 255 aa14.26□□□□□ -0.13
UBBP4-202ENST00000584755 SARNPP82979 210 aaKnown RBP14.26□□□□□ -0.13
UBBP4-202ENST00000584755 ZNF844Q08AG5 666 aa14.26□□□□□ -0.13
UBBP4-202ENST00000584755 HYAL1Q12794 435 aa14.26□□□□□ -0.13
UBBP4-202ENST00000584755 MPPE1Q53F39 396 aa14.26□□□□□ -0.13
UBBP4-202ENST00000584755 SYCP2LQ5T4T6 812 aa14.26□□□□□ -0.13
UBBP4-202ENST00000584755 LRRC8BQ6P9F7 803 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms