RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 FHOD1Q9Y613 1164 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 DOCK9Q9BZ29 2069 aa14.89□□□□□ -0.03
SMARCE1-216ENST00000580419 TRPM6Q9BX84 2022 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 LAMA5O15230 3695 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 A0A1W2PR77 199 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 ILVBLA1L0T0 632 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 E9PAM4 449 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 C1QTNF3-AMACRE9PGA6 284 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 TNFSF14O43557 240 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 PLRG1O43660 514 aaKnown RBP14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 ABCB7O75027 752 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 GRAP2O75791 330 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 CYP1A1P04798 512 aaPredicted RBP14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 TPM2P07951 284 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 C1SP09871 688 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 MMP8P22894 467 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 CD38P28907 300 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 ETFBP38117 255 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 STK19P49842 368 aaPredicted RBP14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 C21orf59P57076 290 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 RAPGEF1Q13905 1077 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 DLG2Q15700 870 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 ARTNQ5T4W7 220 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 C6orf118Q5T5N4 469 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 CCNI2Q6ZMN8 369 aaPredicted RBP14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 TMPRSS7Q7RTY8 843 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 GALNT15Q8N3T1 639 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 FAM174AQ8TBP5 190 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 GANCQ8TET4 914 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 CAMK1GQ96NX5 476 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 ELF4Q99607 663 aaPredicted RBP14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 CEP44Q9C0F1 390 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 PREBQ9HCU5 417 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 LMBRD1Q9NUN5 540 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 TOR4AQ9NXH8 423 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 ZMIZ1Q9ULJ6 1067 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 PCDHGA1Q9Y5H4 931 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 SLCO1B1Q9Y6L6 691 aa14.88□□□□□ -0.03
SMARCE1-216ENST00000580419 ADCY5O95622 1261 aa14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 TOP3BO95985 862 aaKnown RBP14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 IL1BP01584 269 aa14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 JAM2P57087 298 aa14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 CDR2Q01850 454 aa14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 DEUP1Q05D60 604 aa14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 FAM102AQ5T9C2 384 aaPredicted RBP14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 NAPEPLDQ6IQ20 393 aa14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 ADAT2Q7Z6V5 191 aaKnown RBP14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 NOP9Q86U38 636 aaKnown RBP14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 PRPF39Q86UA1 669 aaKnown RBP14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 CHCHD4Q8N4Q1 142 aa14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 OR52K2Q8NGK3 314 aa14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 RHBDD1Q8TEB9 315 aa14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 SETD7Q8WTS6 366 aaKnown RBP14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 GANQ9H2C0 597 aa14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 ARHGAP20Q9P2F6 1191 aa14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 ZNF212Q9UDV6 495 aa14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 NOCTQ9UK39 431 aaKnown RBP14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 KLK13Q9UKR3 277 aa14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 URB1O60287 2271 aaKnown RBP14.87□□□□□ -0.03
SMARCE1-216ENST00000580419 H0Y8X5 98 aa14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 I6L893 689 aaPredicted RBP14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 PRNPP04156 253 aa14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 SRCP12931 536 aa14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 FLT3P36888 993 aa14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 PSMD8P48556 350 aa14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 ARRB1P49407 418 aaPredicted RBP14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 SULT1E1P49888 294 aa14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 CENPCQ03188 943 aa14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 AGBL4Q5VU57 503 aa14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 STRADAQ7RTN6 431 aa14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 C14orf80Q86SX3 495 aa14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 SLCO6A1Q86UG4 719 aa14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 CIR1Q86X95 450 aaPredicted RBP14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 CACTIN-AS1Q8N1I8 211 aa14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 OR14C36Q8NHC7 312 aa14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 CENPIQ92674 756 aaPredicted RBP14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 ISG20Q96AZ6 181 aaKnown RBP14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 TBCBQ99426 244 aa14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 OSBPL2Q9H1P3 480 aa14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 EBF2Q9HAK2 575 aa14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 GDF3Q9NR23 364 aa14.86□□□□□ -0.03
SMARCE1-216ENST00000580419 CACNA1GO43497 2377 aa14.85□□□□□ -0.03
SMARCE1-216ENST00000580419 SYNJ2BP-COX16A0A087WUM0 186 aa14.85□□□□□ -0.03
SMARCE1-216ENST00000580419 PRAMEF26H0Y7S4 382 aa14.85□□□□□ -0.03
SMARCE1-216ENST00000580419 TLR4O00206 839 aa14.85□□□□□ -0.03
SMARCE1-216ENST00000580419 RHOCP08134 193 aa14.85□□□□□ -0.03
SMARCE1-216ENST00000580419 PNMA6AP0CW24 399 aaPredicted RBP14.85□□□□□ -0.03
SMARCE1-216ENST00000580419 SPINK2P20155 84 aa14.85□□□□□ -0.03
SMARCE1-216ENST00000580419 SOX5P35711 763 aa14.85□□□□□ -0.03
SMARCE1-216ENST00000580419 PTPN9P43378 593 aa14.85□□□□□ -0.03
SMARCE1-216ENST00000580419 NXPH1P58417 271 aa14.85□□□□□ -0.03
SMARCE1-216ENST00000580419 KRT31Q15323 416 aa14.85□□□□□ -0.03
SMARCE1-216ENST00000580419 SMAD1Q15797 465 aaKnown RBP14.85□□□□□ -0.03
SMARCE1-216ENST00000580419 ARL13BQ3SXY8 428 aa14.85□□□□□ -0.03
SMARCE1-216ENST00000580419 SETMARQ53H47 684 aaPredicted RBP14.85□□□□□ -0.03
SMARCE1-216ENST00000580419 ALFQ53S48 1182 aa14.85□□□□□ -0.03
SMARCE1-216ENST00000580419 FKBP15Q5T1M5 1219 aa14.85□□□□□ -0.03
SMARCE1-216ENST00000580419 RETSATQ6NUM9 610 aa14.85□□□□□ -0.03
SMARCE1-216ENST00000580419 ANKRD20A12PQ8NF67 263 aa14.85□□□□□ -0.03
SMARCE1-216ENST00000580419 OR2A12Q8NGT7 310 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms