RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 THAP12O43422 761 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 LATO43561 262 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 RNGTTO60942 597 aaKnown RBP13.76□□□□□ -0.21
TRAF4-214ENST00000580073 HSF2BPO75031 334 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 IGLV3-25P01717 112 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 FYNP06241 537 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 TBC1D3HP0C7X1 549 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 RXRGP48443 463 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 ACADVLP49748 655 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 NXPH1P58417 271 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 CDK17Q00537 523 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 NR1I3Q14994 352 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 SYCP1Q15431 976 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 FSCBQ5H9T9 825 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 TBC1D3GQ6DHY5 549 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 TBC1D3CQ6IPX1 549 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 TRIM69Q86WT6 500 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 GATAD2AQ86YP4 633 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 TBC1D3Q8IZP1 549 aaPredicted RBP13.76□□□□□ -0.21
TRAF4-214ENST00000580073 STK40Q8N2I9 435 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 AADATQ8N5Z0 425 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 ADAM32Q8TC27 787 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 ERGIC2Q96RQ1 377 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 UBL7Q96S82 380 aaPredicted RBP13.76□□□□□ -0.21
TRAF4-214ENST00000580073 NRSN2Q9GZP1 204 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 ASNSD1Q9NWL6 643 aa13.76□□□□□ -0.21
TRAF4-214ENST00000580073 TRPM6Q9BX84 2022 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 A0A1W2PR77 199 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 FAM149AA5PLN7 773 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 E5RJQ4 531 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 FOXN3O00409 490 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-214ENST00000580073 PLRG1O43660 514 aaKnown RBP13.75□□□□□ -0.21
TRAF4-214ENST00000580073 PDGFRAP16234 1089 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 CTSOP43234 321 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-214ENST00000580073 PLK1P53350 603 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 UBXN1Q04323 297 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 STAT4Q14765 748 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 ARHGAP44Q17R89 818 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 SOWAHCQ53LP3 525 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-214ENST00000580073 ZC3H12AQ5D1E8 599 aaKnown RBP13.75□□□□□ -0.21
TRAF4-214ENST00000580073 KCNT1Q5JUK3 1230 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 ACBD5Q5T8D3 534 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-214ENST00000580073 HES3Q5TGS1 186 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 MMS22LQ6ZRQ5 1243 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 TMEM110Q86TL2 294 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 CCAR2Q8N163 923 aaKnown RBP13.75□□□□□ -0.21
TRAF4-214ENST00000580073 SHC3Q92529 594 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 PTPRN2Q92932 1015 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 RPL10LQ96L21 214 aaKnown RBP13.75□□□□□ -0.21
TRAF4-214ENST00000580073 RPRD1AQ96P16 312 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-214ENST00000580073 DCBLD2Q96PD2 775 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 SLC4A5Q9BY07 1137 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 PREBQ9HCU5 417 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 PLCB1Q9NQ66 1216 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 DDIT4Q9NX09 232 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 PAXBP1Q9Y5B6 917 aa13.75□□□□□ -0.21
TRAF4-214ENST00000580073 ARID1BQ8NFD5 2236 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-214ENST00000580073 FASNP49327 2511 aaKnown RBP13.74□□□□□ -0.21
TRAF4-214ENST00000580073 PRAMEF26H0Y7S4 382 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 PLK4O00444 970 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 GABBR2O75899 941 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 WNT1P04628 370 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 UCHL3P15374 230 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 PBX1P40424 430 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 KRT83P78385 493 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 PDCLQ13371 301 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 ACCSLQ4AC99 568 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 EFHC1Q5JVL4 640 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 SFMBT2Q5VUG0 894 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 SYPL2Q5VXT5 272 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-214ENST00000580073 APCDD1Q8J025 514 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 CACTIN-AS1Q8N1I8 211 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 EID2Q8N6I1 236 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 FAM174AQ8TBP5 190 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 FAM131CQ96AQ9 280 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 FAM129BQ96TA1 746 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 DYRK4Q9NR20 520 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 FAM207AQ9NSI2 230 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-214ENST00000580073 RRN3Q9NYV6 651 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 CYTH4Q9UIA0 394 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 SLCO3A1Q9UIG8 710 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 VPS28Q9UK41 221 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 AK5Q9Y6K8 562 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 NBEAQ8NFP9 2946 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 ITPR1Q14643 2758 aa13.74□□□□□ -0.21
TRAF4-214ENST00000580073 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.73□□□□□ -0.21
TRAF4-214ENST00000580073 C10orf142B7Z368 130 aa13.73□□□□□ -0.21
TRAF4-214ENST00000580073 RIOK3O14730 519 aaKnown RBP13.73□□□□□ -0.21
TRAF4-214ENST00000580073 ATP9BO43861 1147 aa13.73□□□□□ -0.21
TRAF4-214ENST00000580073 CLDN11O75508 207 aa13.73□□□□□ -0.21
TRAF4-214ENST00000580073 CKMT2P17540 419 aa13.73□□□□□ -0.21
TRAF4-214ENST00000580073 DRD3P35462 400 aa13.73□□□□□ -0.21
TRAF4-214ENST00000580073 CLCN1P35523 988 aa13.73□□□□□ -0.21
TRAF4-214ENST00000580073 STK19P49842 368 aaPredicted RBP13.73□□□□□ -0.21
TRAF4-214ENST00000580073 PPP2CBP62714 309 aa13.73□□□□□ -0.21
TRAF4-214ENST00000580073 PPP2CAP67775 309 aa13.73□□□□□ -0.21
TRAF4-214ENST00000580073 ZNF177Q13360 481 aaPredicted RBP13.73□□□□□ -0.21
TRAF4-214ENST00000580073 DRAP1Q14919 205 aaPredicted RBP13.73□□□□□ -0.21
TRAF4-214ENST00000580073 FKBP15Q5T1M5 1219 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms