RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 C4orf22Q6V702 233 aa10.98□□□□□ -0.65
SS18-213ENST00000579640 JAMLQ86YT9 394 aa10.98□□□□□ -0.65
SS18-213ENST00000579640 ETFBKMTQ8IXQ9 262 aa10.98□□□□□ -0.65
SS18-213ENST00000579640 CCDC33Q8N5R6 958 aa10.98□□□□□ -0.65
SS18-213ENST00000579640 LRRN4CLQ8ND94 238 aa10.98□□□□□ -0.65
SS18-213ENST00000579640 ST13P5Q8NFI4 369 aaPredicted RBP10.98□□□□□ -0.65
SS18-213ENST00000579640 OR52K2Q8NGK3 314 aa10.98□□□□□ -0.65
SS18-213ENST00000579640 WFDC5Q8TCV5 224 aa10.98□□□□□ -0.65
SS18-213ENST00000579640 WFIKKN2Q8TEU8 576 aa10.98□□□□□ -0.65
SS18-213ENST00000579640 UBXN4Q92575 508 aa10.98□□□□□ -0.65
SS18-213ENST00000579640 ACDQ96AP0 544 aa10.98□□□□□ -0.65
SS18-213ENST00000579640 SPON2Q9BUD6 331 aa10.98□□□□□ -0.65
SS18-213ENST00000579640 C2orf49Q9BVC5 232 aaPredicted RBP10.98□□□□□ -0.65
SS18-213ENST00000579640 RAB17Q9H0T7 212 aa10.98□□□□□ -0.65
SS18-213ENST00000579640 KCNK12Q9HB15 430 aa10.98□□□□□ -0.65
SS18-213ENST00000579640 PCDH9Q9HC56 1237 aa10.98□□□□□ -0.65
SS18-213ENST00000579640 HAUS2Q9NVX0 235 aa10.98□□□□□ -0.65
SS18-213ENST00000579640 PRKAG3Q9UGI9 489 aa10.98□□□□□ -0.65
SS18-213ENST00000579640 VPS28Q9UK41 221 aa10.98□□□□□ -0.65
SS18-213ENST00000579640 CLEC4EQ9ULY5 219 aa10.98□□□□□ -0.65
SS18-213ENST00000579640 SLC27A6Q9Y2P4 619 aa10.98□□□□□ -0.65
SS18-213ENST00000579640 OR51B4Q9Y5P0 310 aa10.98□□□□□ -0.65
SS18-213ENST00000579640 NYNRINQ9P2P1 1898 aaKnown RBP10.97□□□□□ -0.65
SS18-213ENST00000579640 MYOFQ9NZM1 2061 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 C5orf60A6NFR6 353 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 LOC730098B7Z3J9 87 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 TTI1O43156 1089 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 KRT14P02533 472 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 PABPC1P11940 636 aaKnown RBP10.97□□□□□ -0.65
SS18-213ENST00000579640 MZF1P28698 734 aaPredicted RBP10.97□□□□□ -0.65
SS18-213ENST00000579640 HLA-FP30511 346 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 DGKGP49619 791 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 RENBPP51606 427 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 GEMIN4P57678 1058 aaKnown RBP10.97□□□□□ -0.65
SS18-213ENST00000579640 SULT2A1Q06520 285 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 TNK2Q07912 1038 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 PTK6Q13882 451 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 HNRNPDQ14103 355 aaKnown RBP10.97□□□□□ -0.65
SS18-213ENST00000579640 RFTN1Q14699 578 aaPredicted RBP10.97□□□□□ -0.65
SS18-213ENST00000579640 PLEKHG6Q3KR16 790 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 ARHGAP36Q6ZRI8 547 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 KIAA0907Q7Z7F0 614 aaPredicted RBP10.97□□□□□ -0.65
SS18-213ENST00000579640 METTL3Q86U44 580 aaKnown RBP10.97□□□□□ -0.65
SS18-213ENST00000579640 AHI1Q8N157 1196 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 FAM71DQ8N9W8 422 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 CSGALNACT1Q8TDX6 532 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 MAML1Q92585 1016 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 DNASE1L2Q92874 299 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 ALG14Q96F25 216 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 LRRC1Q9BTT6 524 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 ABCB8Q9NUT2 735 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 DNAJC17Q9NVM6 304 aaKnown RBP10.97□□□□□ -0.65
SS18-213ENST00000579640 THEGQ9P2T0 379 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 LIMD1Q9UGP4 676 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 GGA2Q9UJY4 613 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 TRHDEQ9UKU6 1024 aa10.97□□□□□ -0.65
SS18-213ENST00000579640 REV3LO60673 3130 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 A0A0A0MRY4 1105 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 OPHN1O60890 802 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 TULP3O75386 442 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 GCATO75600 419 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 IFNB1P01574 187 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 CISD3P0C7P0 127 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 CCNB1P14635 433 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 IL9P15248 144 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 CD70P32970 193 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 GJA4P35212 333 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 CLCN6P51797 869 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 GDF10P55107 478 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 TFF2Q03403 129 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 SLC20A2Q08357 652 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 GAB4Q2WGN9 574 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 PITRM1Q5JRX3 1037 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 GRAMD4Q6IC98 578 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 RETSATQ6NUM9 610 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 BBS5Q8N3I7 341 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 SLC44A3Q8N4M1 653 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 NAT16Q8N8M0 369 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 CASKIN2Q8WXE0 1202 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 RUBCNQ92622 972 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 EXOC4Q96A65 974 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 SPATA13Q96N96 652 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 IL12RB2Q99665 862 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 C10orf88Q9H8K7 445 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 PDFQ9HBH1 243 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 GTSE1Q9NYZ3 720 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 PAK5Q9P286 719 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 DEC1Q9P2X7 70 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 UTP11Q9Y3A2 253 aaKnown RBP10.96□□□□□ -0.65
SS18-213ENST00000579640 NEU2Q9Y3R4 380 aa10.96□□□□□ -0.65
SS18-213ENST00000579640 SHROOM3Q8TF72 1996 aa10.96□□□□□ -0.66
SS18-213ENST00000579640 TARSL2A2RTX5 802 aaKnown RBP10.95□□□□□ -0.66
SS18-213ENST00000579640 OTOL1A6NHN0 477 aaPredicted RBP10.95□□□□□ -0.66
SS18-213ENST00000579640 J3KR12 359 aa10.95□□□□□ -0.66
SS18-213ENST00000579640 RNF103O00237 685 aa10.95□□□□□ -0.66
SS18-213ENST00000579640 CBX4O00257 560 aa10.95□□□□□ -0.66
SS18-213ENST00000579640 NDC80O14777 642 aa10.95□□□□□ -0.66
SS18-213ENST00000579640 ZMPSTE24O75844 475 aa10.95□□□□□ -0.66
SS18-213ENST00000579640 PTPN3P26045 913 aa10.95□□□□□ -0.66
SS18-213ENST00000579640 PFKPQ01813 784 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms